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| Status |
Public on Oct 01, 2006 |
| Title |
Full_Burkholderia_pseudomallei_Genome |
| Technology type |
spotted DNA/cDNA |
| Distribution |
non-commercial |
| Organism |
Burkholderia pseudomallei K96243 |
| Manufacturer |
DSO/NCC lab |
| Manufacture protocol |
as described in DSO/NCC Labs manual
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| Description |
spotted DNA
This set includes 8836 PCR probes (30 mers) designed in-house using Primer 3
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| Contributor(s) |
Tan P |
| Submission date |
Aug 10, 2006 |
| Last update date |
Sep 04, 2007 |
| Contact name |
Fiona Rodrigues |
| Organization name |
Genome Institute of Singapore
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| Department |
Cell and Medical Biology
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| Lab |
4
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| Street address |
60 Biopolis Street, #02-01 Genome
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| City |
Singapore |
| ZIP/Postal code |
138672 |
| Country |
Singapore |
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| Samples (47)
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GSM126531, GSM126532, GSM126533, GSM126534, GSM126535, GSM126536
GSM126537, GSM126538, GSM126539, GSM126540, GSM126541, GSM126542, GSM126543, GSM126544, GSM126545, GSM126546, GSM126547, GSM126548, GSM126549, GSM126550, GSM126551, GSM126552, GSM126553, GSM126554, GSM126555, GSM126556, GSM126557, GSM126558, GSM126559, GSM126560, GSM126561, GSM126562, GSM126563, GSM126564, GSM126565, GSM126566, GSM126567, GSM126568, GSM126569, GSM126570, GSM126571, GSM126572, GSM126573, GSM126574, GSM126575, GSM126576, GSM126577
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| Series (1) |
| GSE5495 |
Genome-Wide Mapping of Growth Regulated Genes in Burkholderia pseudomallei |
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| Data table header descriptions |
| ID |
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| RANGE_GB |
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| RANGE_START |
start coordinates of the gene in the genbank file |
| RANGE_END |
end coordinates of the gene in the genbank file |
| RANGE_STRAND |
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| GENOME ACC |
Genbank files that contains the genome |
| ORF |
Gene identity from genbank file |
| GENE_NAME |
descriptive name of the gene |
| SPOT_ID |
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| Data table |
| ID |
RANGE_GB |
RANGE_START |
RANGE_END |
RANGE_STRAND |
GENOME ACC |
ORF |
GENE_NAME |
SPOT_ID |
| 3411402 |
BX571965.1 |
1 |
1116 |
- |
BX571965.1 |
BPSL0001 |
conserved hypothetical protein |
|
| 3140602 |
BX571965.1 |
1161 |
2375 |
- |
BX571965.1 |
BPSL0002 |
putative membrane protein |
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| 2843302 |
BX571965.1 |
3114 |
5168 |
- |
BX571965.1 |
BPSL0003 |
conserved hypothetical protein |
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| 3140402 |
BX571965.1 |
3114 |
5168 |
- |
BX571965.1 |
BPSL0003 |
conserved hypothetical protein |
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| 324503 |
BX571965.1 |
5488 |
5766 |
+ |
BX571965.1 |
BPSL0004 |
DNA-binding protein HU-alpha |
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| 3140302 |
BX571965.1 |
5869 |
7209 |
- |
BX571965.1 |
BPSL0005 |
putative cobalamin synthesis protein/P47K |
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| 2843202 |
BX571965.1 |
5869 |
7209 |
- |
BX571965.1 |
BPSL0005 |
putative cobalamin synthesis protein/P47K |
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| 3140202 |
BX571965.1 |
7528 |
8013 |
- |
BX571965.1 |
BPSL0006 |
putative exported protein |
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| 2843102 |
BX571965.1 |
7528 |
8013 |
- |
BX571965.1 |
BPSL0006 |
putative exported protein |
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| 2843002 |
BX571965.1 |
8395 |
10668 |
+ |
BX571965.1 |
BPSL0007 |
general secretory pathway protein D |
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| 162503 |
BX571965.1 |
8395 |
10668 |
+ |
BX571965.1 |
BPSL0007 |
general secretory pathway protein D |
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| 2919502 |
BX571965.1 |
10665 |
12158 |
+ |
BX571965.1 |
BPSL0008 |
general secretory pathway protein E |
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| 2919602 |
BX571965.1 |
10665 |
12158 |
+ |
BX571965.1 |
BPSL0008 |
general secretory pathway protein E |
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| 2919402 |
BX571965.1 |
12163 |
13380 |
+ |
BX571965.1 |
BPSL0009 |
general secretory pathway protein F |
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| 2789402 |
BX571965.1 |
12163 |
13380 |
+ |
BX571965.1 |
BPSL0009 |
general secretory pathway protein F |
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| 243703 |
BX571965.1 |
13452 |
13862 |
- |
BX571965.1 |
BPSL0010 |
putative general secretory pathway protein |
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| 2789302 |
BX571965.1 |
14010 |
14462 |
+ |
BX571965.1 |
BPSL0011 |
general secretory pathway protein G |
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| 2919302 |
BX571965.1 |
14010 |
14462 |
+ |
BX571965.1 |
BPSL0011 |
general secretory pathway protein G |
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| 2789202 |
BX571965.1 |
14617 |
15096 |
+ |
BX571965.1 |
BPSL0012 |
general secretory pathway protein H |
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| 2789102 |
BX571965.1 |
15099 |
15503 |
+ |
BX571965.1 |
BPSL0013 |
general secretory pathway protein I |
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Total number of rows: 8916
Table truncated, full table size 760 Kbytes.
| Supplementary data files not provided |
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