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Sample GSM126541 Query DataSets for GSM126541
Status Public on Oct 01, 2006
Title 6hvsRef
Sample type RNA
 
Channel 1
Source name 6 hour
Organism Burkholderia pseudomallei K96243
Characteristics Strain: K96243
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction, Megaclear Ambion purification of total RNA, MICROBexpress Ambion Bacterial Messenger RNA extraction Kit"
Label Cy3
Label protocol Approximately 1.5ug of mRNA was processed to produce amino-allyl labelled cDNA
 
Channel 2
Source name Reference
Organism Burkholderia pseudomallei K96243
Characteristics Strain: K96243
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction, Megaclear Ambion purification of total RNA, MICROBexpress Ambion Bacterial Messenger RNA extraction Kit"
Label Cy5
Label protocol Approximately 1.5ug of mRNA was processed to produce amino-allyl labelled cDNA
 
 
Hybridization protocol J. David Gladstone Institutes Genomic Core Laboratory SOP
Scan protocol J. David Gladstone Institutes Genomic Core Laboratory SOP
Description Series of 47 timed samples
Data processing GeneData Expressionist
 
Submission date Aug 10, 2006
Last update date Aug 14, 2006
Contact name Fiona Rodrigues
Organization name Genome Institute of Singapore
Department Cell and Medical Biology
Lab 4
Street address 60 Biopolis Street, #02-01 Genome
City Singapore
ZIP/Postal code 138672
Country Singapore
 
Platform ID GPL4078
Series (1)
GSE5495 Genome-Wide Mapping of Growth Regulated Genes in Burkholderia pseudomallei

Data table header descriptions
ID_REF
VALUE Normalised log ratios; data normalised using a LOWESS protocol; missing profiles are estimted using SVDImpute

Data table
ID_REF VALUE
159903 0.011669
160003 -0.004935
160103 0.251796
160203 -0.01446
160803 -0.049011
161403 0.111014
162103 0.014228
162203 -0.010917
162403 0.017061
162503 -0.093433
162603 -0.097943
163703 0.046258
164103 -0.021732
164603 -0.273445
165503 0.002342
165603 -0.101456
166103 0.006791
166203 0.072384
166403 -0.008926
166903 0.052329

Total number of rows: 5289

Table truncated, full table size 88 Kbytes.




Supplementary file Size Download File type/resource
GSM126541.gpr.gz 1.3 Mb (ftp)(http) GPR

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