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Sample GSM126546 Query DataSets for GSM126546
Status Public on Oct 01, 2006
Title 8.5hvsRef
Sample type RNA
 
Channel 1
Source name 8.5 hour
Organism Burkholderia pseudomallei K96243
Characteristics Strain: K96243
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction, Megaclear Ambion purification of total RNA, MICROBexpress Ambion Bacterial Messenger RNA extraction Kit"
Label Cy3
Label protocol Approximately 1.5ug of mRNA was processed to produce amino-allyl labelled cDNA
 
Channel 2
Source name Reference
Organism Burkholderia pseudomallei K96243
Characteristics Strain: K96243
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction, Megaclear Ambion purification of total RNA, MICROBexpress Ambion Bacterial Messenger RNA extraction Kit"
Label Cy5
Label protocol Approximately 1.5ug of mRNA was processed to produce amino-allyl labelled cDNA
 
 
Hybridization protocol J. David Gladstone Institutes Genomic Core Laboratory SOP
Scan protocol J. David Gladstone Institutes Genomic Core Laboratory SOP
Description Series of 47 timed samples
Data processing GeneData Expressionist
 
Submission date Aug 10, 2006
Last update date Aug 14, 2006
Contact name Fiona Rodrigues
Organization name Genome Institute of Singapore
Department Cell and Medical Biology
Lab 4
Street address 60 Biopolis Street, #02-01 Genome
City Singapore
ZIP/Postal code 138672
Country Singapore
 
Platform ID GPL4078
Series (1)
GSE5495 Genome-Wide Mapping of Growth Regulated Genes in Burkholderia pseudomallei

Data table header descriptions
ID_REF
VALUE Normalised log ratios; data normalised using a LOWESS protocol; missing profiles are estimted using SVDImpute

Data table
ID_REF VALUE
159903 -0.134295
160003 -0.085778
160103 0.057138
160203 -0.043354
160803 -0.059084
161403 -0.091977
162103 -0.038387
162203 -0.036373
162403 0.031269
162503 0.075144
162603 -0.068411
163703 -0.016366
164103 -0.06326
164603 -0.076323
165503 -0.073292
165603 -0.062783
166103 0.252809
166203 0.019288
166403 0.022549
166903 -0.00915

Total number of rows: 5289

Table truncated, full table size 89 Kbytes.




Supplementary file Size Download File type/resource
GSM126546.gpr.gz 1.2 Mb (ftp)(http) GPR

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