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Sample GSM1308590 Query DataSets for GSM1308590
Status Public on Apr 05, 2014
Title CC_A_rep2
Sample type RNA
 
Source name good quality embryo_CCs
Organism Homo sapiens
Characteristics embryo quality: good quality
tissue: oocytes at metaphase II stage
cell type: Cumulus Cells
Extracted molecule total RNA
Extraction protocol Total RNA from each sample was quantified by the NanoDrop ND-1000 and RNA integrity was assessed by standard denaturing agarose gel electrophoresis.
Label Cy3
Label protocol Agilent Quick Amp Labeling Kit was used for sample labeling.
 
Hybridization protocol Hybridization was performed in Agilent’s SureHyb Hybridization Chambers.
Scan protocol After washing, slides were scanned with the Agilent DNA Microarray Scanner.
Description 5A
Data processing Data was extracted using Agilent Feature Extraction software. Results were provided in the Raw Intensity.xls. Normalization was performed using the Agilent GeneSpring GX v12.1 software.
 
Submission date Jan 16, 2014
Last update date Apr 05, 2014
Contact name Dawei Chen
E-mail(s) chdawei1987@gmail.com
Organization name USTC
Department Life Sciences School
Street address Huangshan Rd.
City Hefei
State/province Anhui
ZIP/Postal code 230021
Country China
 
Platform ID GPL15314
Series (1)
GSE54135 Molecular signature in human cumulus cells related to embryonic developmental potential

Data table header descriptions
ID_REF
VALUE normalized signal intensities

Data table
ID_REF VALUE
ASHG19A3L0003190 3.17503
ASHG19A3L0003189 3.17503
ASHG19A3L0003188 4.360653
ASHG19A3L0003187 3.746617
ASHG19A3L0003186 3.17503
ASHG19A3L0003185 3.17503
ASHG19A3L0003184 24.79079
ASHG19A3L0003183 3.17503
ASHG19A3L0003182 3.17503
ASHG19A3L0003181 53.50168
ASHG19A3L0003180 694.5819
ASHG19A3L0003179 3.17503
ASHG19A3L0003178 9.814273
ASHG19A3L0003177 8.299825
ASHG19A3L0003176 3.17503
ASHG19A3L0003175 3.17503
ASHG19A3L0003174 12.7248
ASHG19A3L0003173 3.17503
ASHG19A3L0003172 3.719654
ASHG19A3L0003171 6.331178

Total number of rows: 58893

Table truncated, full table size 1418 Kbytes.




Supplementary file Size Download File type/resource
GSM1308590_5A.txt.gz 2.7 Mb (ftp)(http) TXT
Processed data included within Sample table

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