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Series GSE54135 Query DataSets for GSE54135
Status Public on Apr 05, 2014
Title Molecular signature in human cumulus cells related to embryonic developmental potential
Organism Homo sapiens
Experiment type Expression profiling by array
Non-coding RNA profiling by array
Summary The objective of the present study was to investigate gene expression profiles of human Cumulus cells isolated from oocytes at metaphase II stage, under controlled ovarian stimulation (COS) cycle and to evaluate the relationship of embryo quality with molecular signatures in Cumulus cells. This study has been performed by microarray analysis in order to identify potential biomarkers related to oocyte developmental potential.
For each patient, the CCs were classified into two groups (good quality embryo group and bad quality embryo group) and pooled. From the total of 14 samples, total RNA was purified. After removal of rRNA, each sample was amplified and transcribed into fluorescent cRNA along the entire length of the transcripts without 3’ bias utilizing a random priming method. The amplified and labelled cRNA were pooled as good quality and bad quality group followed by hybridization, scanning and data analysis.Three independent repetitions were carried out, thus a total of 6 chips were employed in this study.
 
Overall design the objective of the present study was to investigate gene expression profiles of human CCs isolated from oocytes at metaphase II stage, under controlled ovarian stimulation (COS) cycle and to evaluate the relation of following embryo quality to molecular signatures in CCs.
 
Contributor(s) Chen D, Xu X
Citation(s) 24899471
Submission date Jan 16, 2014
Last update date Sep 03, 2018
Contact name Dawei Chen
E-mail(s) chdawei1987@gmail.com
Organization name USTC
Department Life Sciences School
Street address Huangshan Rd.
City Hefei
State/province Anhui
ZIP/Postal code 230021
Country China
 
Platforms (1)
GPL15314 Arraystar Human LncRNA microarray V2.0 (Agilent-033010 Probe Name version)
Samples (6)
GSM1308588 CC_A_rep1
GSM1308589 CC_B_rep1
GSM1308590 CC_A_rep2
Relations
BioProject PRJNA235274

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE54135_RAW.tar 16.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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