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Sample GSM1308591 Query DataSets for GSM1308591
Status Public on Apr 05, 2014
Title CC_B_rep2
Sample type RNA
 
Source name bad quality embryo_CCs
Organism Homo sapiens
Characteristics embryo quality: bad quality
tissue: oocytes at metaphase II stage
cell type: Cumulus Cells
Extracted molecule total RNA
Extraction protocol Total RNA from each sample was quantified by the NanoDrop ND-1000 and RNA integrity was assessed by standard denaturing agarose gel electrophoresis.
Label Cy3
Label protocol Agilent Quick Amp Labeling Kit was used for sample labeling.
 
Hybridization protocol Hybridization was performed in Agilent’s SureHyb Hybridization Chambers.
Scan protocol After washing, slides were scanned with the Agilent DNA Microarray Scanner.
Description 5B
Data processing Data was extracted using Agilent Feature Extraction software. Results were provided in the Raw Intensity.xls. Normalization was performed using the Agilent GeneSpring GX v12.1 software.
 
Submission date Jan 16, 2014
Last update date Apr 05, 2014
Contact name Dawei Chen
E-mail(s) chdawei1987@gmail.com
Organization name USTC
Department Life Sciences School
Street address Huangshan Rd.
City Hefei
State/province Anhui
ZIP/Postal code 230021
Country China
 
Platform ID GPL15314
Series (1)
GSE54135 Molecular signature in human cumulus cells related to embryonic developmental potential

Data table header descriptions
ID_REF
VALUE normalized signal intensities

Data table
ID_REF VALUE
ASHG19A3L0003190 3.303447
ASHG19A3L0003189 3.227007
ASHG19A3L0003188 10.95261
ASHG19A3L0003187 6.745706
ASHG19A3L0003186 3.173748
ASHG19A3L0003185 3.30368
ASHG19A3L0003184 14.01146
ASHG19A3L0003183 3.37189
ASHG19A3L0003182 3.122659
ASHG19A3L0003181 37.7405
ASHG19A3L0003180 463.6208
ASHG19A3L0003179 3.215431
ASHG19A3L0003178 3.158181
ASHG19A3L0003177 4.184082
ASHG19A3L0003176 3.102356
ASHG19A3L0003175 3.355754
ASHG19A3L0003174 8.545264
ASHG19A3L0003173 3.032812
ASHG19A3L0003172 6.829654
ASHG19A3L0003171 3.046281

Total number of rows: 58893

Table truncated, full table size 1434 Kbytes.




Supplementary file Size Download File type/resource
GSM1308591_5B.txt.gz 2.8 Mb (ftp)(http) TXT
Processed data included within Sample table

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