|
| Status |
Public on Jun 20, 2014 |
| Title |
PAPI26 [SNP] |
| Sample type |
genomic |
| |
|
| Source name |
Papillary carcinoma
|
| Organism |
Homo sapiens |
| Characteristics |
subtype: Encapsulated papillary carcinoma
grade: 3
er: ER+
pr: PR+
her2: HER-
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA was extracted using the Qiagen DNA Blood and Tissue kit
|
| Label |
Biotin
|
| Label protocol |
As per manufacturer (Affymetrix)
|
| |
|
| Hybridization protocol |
As per manufacturer (Affymetrix)
|
| Scan protocol |
As per manufacturer (Affymetrix)
|
| Description |
Hybridised to SNP6
|
| Data processing |
Raw data were analysed using the CRMAv2 algorithm in the aroma.affymetrix package.
|
| |
|
| Submission date |
Mar 06, 2014 |
| Last update date |
Jun 21, 2014 |
| Contact name |
Charlotte K Y Ng |
| Organization name |
University Hospital Basel
|
| Department |
Pathology
|
| Street address |
Schönbeinstrasse 40
|
| City |
Basel |
| ZIP/Postal code |
4003 |
| Country |
Switzerland |
| |
|
| Platform ID |
GPL6801 |
| Series (2) |
| GSE55638 |
SNP6 profiling of papillary carcinoma of the breast |
| GSE55640 |
SNP6 and expression profiling of papillary carcinoma of the breast |
|
