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| Status |
Public on Jan 01, 2007 |
| Title |
B. longum mono-associated (10d) gnotobiotic NMRI mice LCM cecal epithelium (pool of 4 animals)_#9181 |
| Sample type |
RNA |
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| Source name |
B. longum mono-associated (10d) gnotobiotic NMRI mice LCM cecal epithelium (pool of 4 animals)
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| Organism |
Mus musculus |
| Characteristics |
B. longum mono-associated (10d) gnotobiotic NMRI mice LCM cecal epithelium (pool of 4 animals)
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| Extracted molecule |
total RNA |
| Label |
biotin
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| |
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| Description |
Laser captured cecal epithelium from B. longum mono-associated (10d) NMRI adult mice on a standard polysaccharide-rich diet
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| Data processing |
MAS5; scaling = 500
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| Submission date |
Sep 15, 2006 |
| Last update date |
Sep 19, 2006 |
| Contact name |
Justin L. Sonnenburg |
| E-mail(s) |
jsonnenburg@wustl.edu
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| Phone |
314-362-5443
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| URL |
http://gordonlab.wustl.edu/metaview/bt
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| Organization name |
Washington University
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| Department |
Center for Genome Sciences
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| Lab |
Jeffrey I. Gordon
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| Street address |
4444 Forest Park
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| City |
Saint Louis |
| State/province |
MO |
| ZIP/Postal code |
63108 |
| Country |
USA |
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| Platform ID |
GPL1981 |
| Series (1) |
| GSE5870 |
Gnotobiotic mouse cecal epithelium; B.thetaiotaomicron-B. longum mono- versus bi-association, PR chow, NMRI |
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| Data table header descriptions |
| ID_REF |
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| VALUE |
MAS5-calculated Signal intensity |
| ABS_CALL |
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC) |
| DETECTION P-VALUE |
'detection p-value', p-value that indicates the significance level of the detection call |
| Data table |
| ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
| 32094_at |
2447.9 |
A |
0.175989 |
| 35179_at |
764.1 |
A |
0.795978 |
| 35626_at |
340.2 |
A |
0.52062 |
| 36936_at |
2072.1 |
A |
0.397994 |
| 37408_at |
3972.5 |
A |
0.339558 |
| 38521_at |
1047.5 |
A |
0.5 |
| 53076_at |
1358.7 |
A |
0.67917 |
| 91703_at |
748 |
A |
0.837065 |
| 91920_at |
3857.9 |
A |
0.418069 |
| 1405_i_at |
28.8 |
A |
0.996841 |
| 200004_at |
8631 |
P |
0.008057 |
| 200010_at |
283.2 |
A |
0.601074 |
| 200017_at |
656.3 |
A |
0.5 |
| 200024_at |
2880.3 |
A |
0.303711 |
| 200026_at |
7359.5 |
P |
0.023926 |
| 200046_at |
3266.2 |
M |
0.056152 |
| 200642_at |
247.9 |
A |
0.633789 |
| 200643_at |
430.1 |
A |
0.828613 |
| 200651_at |
4456.5 |
P |
0.046143 |
| 200661_at |
198.4 |
A |
0.850342 |
Total number of rows: 1814
Table truncated, full table size 51 Kbytes.
| Supplementary data files not provided |
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