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GEO accession:
Sample GSM139543
Query DataSets for GSM139543
Status
Public on Dec 19, 2008
Title
HB06
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T3
Node: N1
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.68706477071343
117_3p_at
7.55081613114092
1494_3p_f_at
7.43126205071936
1552275_3p_s_at
7.899382083995
1552281_3p_at
9.03798200731136
1552296_3p_at
6.13955569929846
1552302_3p_at
6.05634852711884
1552311_3p_a_at
8.45582903766772
1552321_3p_a_at
4.92358438014364
1552340_3p_at
6.62178704557744
1552343_3p_s_at
7.08914531794054
1552354_3p_at
7.2953893734976
1552476_3p_s_at
7.76194061517814
1552480_3p_s_at
3.64750650843699
1552504_3p_a_at
7.79498541022726
1552518_3p_s_at
5.8809651762467
1552528_3p_at
8.31785943979241
1552535_3p_at
7.77430712990514
1552566_3p_at
6.65053068006872
1552575_3p_a_at
9.82936778627948
Total number of rows:
61297
Table truncated, full table size
2186 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139543.cel.gz
8.5 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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