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Series GSE205568 Query DataSets for GSE205568
Status Public on Mar 09, 2024
Title A pooled treatment-curated breast cancer gene-expression dataset
Sample organism Homo sapiens
Experiment type Expression profiling by array
Third-party reanalysis
Summary Pre-clinical studies reported the immunogenic or immunomodulatory effects of traditional cancer therapies. However, the publicly available well-curated and harmonized breast cancer datasets, such as TCGA, METABRIC, and MetaGxBreast, lack careful curation of treatment regimens. Hence, limited exploration of the impact of therapies on the prognostic/predictive value of breast cancer biomarkers. Herein, we describe a pooled and treatment-curated gene-expression dataset to investigate the impact of treatments on the prognostic/predictive value of biomarkers. We searched the gene expression omnibus database to identify potential human breast cancer gene-expression datasets with anthracycline/taxane treatment. Published datasets with the detailed treatment regimen, clinical endpoint, clinical-pathological, and gene-expression data were extracted and harmonized. The dataset described herein would help researchers explore the interaction between gene-expression biomarkers and immunogenic/immunomodulatory treatments in breast cancer.
 
Overall design Potential gene expression datasets with anthracycline/taxane-containing regimens were extracted from the GEO database on 31 July 2020. The GEO search identified 172 datasets (geo series). Among the 172 datasets identified, 136 datasets were discarded due to 1) non-breast tissue expression profiles, 2) no treatment/outcome/survival data, 3) GEO sub/super-series already selected, 4) non-compactable experimental design, 5) xenografts, and 6) unpublished study. In addition, eight datasets were further discarded due to 1) non-whole genome expression profiles, 2) missingness in gene expression data, and 3) a few common genes with the rest of the datasets. Among the remaining 28 datasets, 23 datasets (2982 samples) were from neoadjuvant settings, and five datasets (754 samples) were from adjuvant settings. Of note, four datasets among the final 23 neoadjuvant datasets have paired expression profiles from pre/mid/post-treatment tumor specimens (n=279). Processed expression values from selected 28 GEO datasets were merged using common genes represented in the different gene expression profiling platforms. Multiple dataset effect correction methods were compared to select the optimal one. The methods compared were 1) combat, 2) quantile, and 3) MAD-quantile. The combat method is designed initially to adjust the microarray dataset for any experiment batch effect. However, combat can also be used to correct dataset effects from the pooled dataset. Furthermore, the quantile method of pooling gene expression rescaled (gene-rescale: expression rescaling per gene) individual datasets is reported to eliminate the dataset effect. Finally, the MAD-quantile method integrates expression rescaling per sample (sample-rescale) with the above gene-rescaling method (quantile method), pooling sample-rescaled and gene-rescaled individual datasets. The quantile method seems superior to the others. The processed expression values given in the series matrix were corrected using the quantile method. The pooled expression matrix corrected using the different dataset-effect correction methods described above were given in the supplementary data and relevant QC metrics.
 
Contributor(s) Jose V, Venet D, Buisseret L, Rothe F, Sotiriou C
Citation https://doi.org/10.31219/osf.io/jbwe4
Submission date Jun 06, 2022
Last update date Mar 10, 2024
Contact name Vinu Jose
E-mail(s) vinu.jose@yahoo.co.in
Organization name Institut Jules Bordet – Université Libre de Bruxelles (ULB)
Lab Breast Cancer Translational Research Laboratory J.C. Heuson (ULB 290)
Street address Rue Meylemeersch 90
City Brussels
ZIP/Postal code 1070
Country Belgium
 
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Reanalysis of GSM519396
Reanalysis of GSM519397
Reanalysis of GSM519398
Reanalysis of GSM519399
Reanalysis of GSM519400
Reanalysis of GSM519401
Reanalysis of GSM519402
Reanalysis of GSM519403
Reanalysis of GSM519404
Reanalysis of GSM519405
Reanalysis of GSM519406
Reanalysis of GSM519407
Reanalysis of GSM519408
Reanalysis of GSM519409
Reanalysis of GSM519410
Reanalysis of GSM519411
Reanalysis of GSM519412
Reanalysis of GSM519413
Reanalysis of GSM519414
Reanalysis of GSM519415
Reanalysis of GSM519416
Reanalysis of GSM519417
Reanalysis of GSM519418
Reanalysis of GSM519419
Reanalysis of GSM519420
Reanalysis of GSM519421
Reanalysis of GSM519422
Reanalysis of GSM519423
Reanalysis of GSM519424
Reanalysis of GSM519425
Reanalysis of GSM519426
Reanalysis of GSM519427
Reanalysis of GSM519428
Reanalysis of GSM519429
Reanalysis of GSM519430
Reanalysis of GSM519431
Reanalysis of GSM519432
Reanalysis of GSM519433
Reanalysis of GSM519434
Reanalysis of GSM519435
Reanalysis of GSM519436
Reanalysis of GSM519437
Reanalysis of GSM519438
Reanalysis of GSM519439
Reanalysis of GSM519440
Reanalysis of GSM519441
Reanalysis of GSM519442
Reanalysis of GSM519443
Reanalysis of GSM1030079
Reanalysis of GSM1030080
Reanalysis of GSM1030081
Reanalysis of GSM1030082
Reanalysis of GSM1030083
Reanalysis of GSM1030084
Reanalysis of GSM1030085
Reanalysis of GSM1030086
Reanalysis of GSM1030087
Reanalysis of GSM1030088
Reanalysis of GSM1030089
Reanalysis of GSM1030090
Reanalysis of GSM1030091
Reanalysis of GSM1030092
Reanalysis of GSM1030093
Reanalysis of GSM1030094
Reanalysis of GSM1030095
Reanalysis of GSM1030096
Reanalysis of GSM1030097
Reanalysis of GSM1030098
Reanalysis of GSM1030099
Reanalysis of GSM1030100
Reanalysis of GSM1030101
Reanalysis of GSM1030102
Reanalysis of GSM1030103
Reanalysis of GSM1030104
Reanalysis of GSM1030105
Reanalysis of GSM1030106
Reanalysis of GSM1030107
Reanalysis of GSM1030108
Reanalysis of GSM1030109
Reanalysis of GSM1030110
Reanalysis of GSM1030111
Reanalysis of GSM1030112
Reanalysis of GSM1030113
Reanalysis of GSM1030114
Reanalysis of GSM1030115
Reanalysis of GSM1030116
Reanalysis of GSM1030117
Reanalysis of GSM1030118
Reanalysis of GSM1030119
Reanalysis of GSM1030120
Reanalysis of GSM1030121
Reanalysis of GSM1030122
Reanalysis of GSM1030123
Reanalysis of GSM1030124
Reanalysis of GSM1030125
Reanalysis of GSM1030126
Reanalysis of GSM1030127
Reanalysis of GSM1030128
Reanalysis of GSM1030129
Reanalysis of GSM1030130
Reanalysis of GSM1030131
Reanalysis of GSM1030132
Reanalysis of GSM1030133
Reanalysis of GSM1030134
Reanalysis of GSM1030135
Reanalysis of GSM1030136
Reanalysis of GSM1030137
Reanalysis of GSM1030138
Reanalysis of GSM1030139
Reanalysis of GSM1030140
Reanalysis of GSM1030141
Reanalysis of GSM1030142
Reanalysis of GSM1030143
Reanalysis of GSM1030144
Reanalysis of GSM1030145
Reanalysis of GSM1030146
Reanalysis of GSM1030147
Reanalysis of GSM1030148
Reanalysis of GSM1030149
Reanalysis of GSM1030150
Reanalysis of GSM1030151
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Reanalysis of GSM1030153
Reanalysis of GSM1030154
Reanalysis of GSM1030155
Reanalysis of GSM1030156
Reanalysis of GSM1030157
Reanalysis of GSM1030158
Reanalysis of GSM1030159
Reanalysis of GSM1030160
Reanalysis of GSM1030161
Reanalysis of GSM1030162
Reanalysis of GSM1030163
Reanalysis of GSM1030164
Reanalysis of GSM1030165
Reanalysis of GSM1030166
Reanalysis of GSM1030167
Reanalysis of GSM1030168
Reanalysis of GSM1030169
Reanalysis of GSM1030170
Reanalysis of GSM1030171
Reanalysis of GSM1030172
Reanalysis of GSM1030173
Reanalysis of GSM1030174
Reanalysis of GSM1030175
Reanalysis of GSM1030176
Reanalysis of GSM1030177
Reanalysis of GSM1030178
Reanalysis of GSM1030179
Reanalysis of GSM1030180
Reanalysis of GSM1030181
Reanalysis of GSM1030182
Reanalysis of GSM1030183
Reanalysis of GSM1030184
Reanalysis of GSM1030185
Reanalysis of GSM1030186
Reanalysis of GSM1030187
Reanalysis of GSM1030188
Reanalysis of GSM1030189
Reanalysis of GSM1030190
Reanalysis of GSM1030191
Reanalysis of GSM1030192
Reanalysis of GSM1030193
Reanalysis of GSM1030194
Reanalysis of GSM1030195
Reanalysis of GSM1030196
Reanalysis of GSM1030197
Reanalysis of GSM1030198
Reanalysis of GSM1030199
Reanalysis of GSM1030200
Reanalysis of GSM1030201
Reanalysis of GSM1030202
Reanalysis of GSM1030203
Reanalysis of GSM1030204
Reanalysis of GSM1030205
Reanalysis of GSM1030206
Reanalysis of GSM1030207
Reanalysis of GSM1030208
Reanalysis of GSM1030209
Reanalysis of GSM1030210
Reanalysis of GSM1030211
Reanalysis of GSM1030212
Reanalysis of GSM1030213
Reanalysis of GSM1030214
Reanalysis of GSM1030215
Reanalysis of GSM1030216
Reanalysis of GSM1030217
Reanalysis of GSM1030218
Reanalysis of GSM1030219
Reanalysis of GSM1030220
Reanalysis of GSM1030221
Reanalysis of GSM1030222
Reanalysis of GSM1030223
Reanalysis of GSM1030224
Reanalysis of GSM1030225
Reanalysis of GSM1030226
Reanalysis of GSM1030227
Reanalysis of GSM1030228
Reanalysis of GSM1030229
Reanalysis of GSM1030230
Reanalysis of GSM1030231
Reanalysis of GSM1030232
Reanalysis of GSM1030233
Reanalysis of GSM1030234
Reanalysis of GSM1030235
Reanalysis of GSM1030236
Reanalysis of GSM1030237
Reanalysis of GSM1030238
Reanalysis of GSM1030239
Reanalysis of GSM1030240
Reanalysis of GSM1030241
Reanalysis of GSM1030242
Reanalysis of GSM1030243
Reanalysis of GSM1030244
Reanalysis of GSM1030245
Reanalysis of GSM1030246
Reanalysis of GSM1030247
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Reanalysis of GSM1030249
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Reanalysis of GSM1030251
Reanalysis of GSM1030252
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Reanalysis of GSM1030256
Reanalysis of GSM1030257
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Reanalysis of GSM1030259
Reanalysis of GSM1030260
Reanalysis of GSM1030261
Reanalysis of GSM1030262
Reanalysis of GSM1030263
Reanalysis of GSM1030264
Reanalysis of GSM1030265
Reanalysis of GSM1030266
Reanalysis of GSM1030267
Reanalysis of GSM1030268
Reanalysis of GSM1030269
Reanalysis of GSM1030270
Reanalysis of GSM1030271
Reanalysis of GSM1030272
Reanalysis of GSM1030273
Reanalysis of GSM1030274
Reanalysis of GSM1030275
Reanalysis of GSM1030276
Reanalysis of GSM1030277
Reanalysis of GSM1030278
Reanalysis of GSM1030279
Reanalysis of GSM1030280
Reanalysis of GSM1030281
Reanalysis of GSM1030282
Reanalysis of GSM1030283
Reanalysis of GSM1030284
Reanalysis of GSM1030285
Reanalysis of GSM1030286
Reanalysis of GSM1030287
Reanalysis of GSM1030288
Reanalysis of GSM1030289
Reanalysis of GSM1030290
Reanalysis of GSM1030291
Reanalysis of GSM1030292
Reanalysis of GSM1030293
Reanalysis of GSM1030294
Reanalysis of GSM1030295
Reanalysis of GSM1030296
Reanalysis of GSM1030297
Reanalysis of GSM1030298
Reanalysis of GSM1030299
Reanalysis of GSM1030300
Reanalysis of GSM1030301
Reanalysis of GSM1030302
Reanalysis of GSM1030303
Reanalysis of GSM1030304
Reanalysis of GSM1030305
Reanalysis of GSM1030306
Reanalysis of GSM1030307
Reanalysis of GSM1030308
Reanalysis of GSM1030309
Reanalysis of GSM1030310
Reanalysis of GSM1030311
Reanalysis of GSM1030312
Reanalysis of GSM1030313
Reanalysis of GSM1030314
Reanalysis of GSM1030315
Reanalysis of GSM1030316
Reanalysis of GSM1030317
Reanalysis of GSM1030318
Reanalysis of GSM1030319
Reanalysis of GSM1030320
Reanalysis of GSM1030321
Reanalysis of GSM1030322
Reanalysis of GSM1030323
Reanalysis of GSM1030324
Reanalysis of GSM1030325
Reanalysis of GSM1030326
Reanalysis of GSM1030327
Reanalysis of GSM1030328
Reanalysis of GSM1030329
Reanalysis of GSM1030330
Reanalysis of GSM1030331
Reanalysis of GSM1030332
Reanalysis of GSM1030333
Reanalysis of GSM1030334
Reanalysis of GSM1030335
Reanalysis of GSM1030336
Reanalysis of GSM1030337
Reanalysis of GSM1030338
Reanalysis of GSM1030339
Reanalysis of GSM1030340
Reanalysis of GSM1030341
Reanalysis of GSM1030342
Reanalysis of GSM1030343
Reanalysis of GSM1030344
Reanalysis of GSM1030345
Reanalysis of GSM1030346
Reanalysis of GSM1030347
Reanalysis of GSM1030348
Reanalysis of GSM1030349
Reanalysis of GSM1030350
Reanalysis of GSM1030351
Reanalysis of GSM1030352
Reanalysis of GSM1030353
Reanalysis of GSM1030354
Reanalysis of GSM1030355
Reanalysis of GSM1030356
Reanalysis of GSM1030357
Reanalysis of GSM505327
Reanalysis of GSM505328
Reanalysis of GSM505329
Reanalysis of GSM505330
Reanalysis of GSM505331
Reanalysis of GSM505333
Reanalysis of GSM505334
Reanalysis of GSM505335
Reanalysis of GSM505336
Reanalysis of GSM505337
Reanalysis of GSM505338
Reanalysis of GSM505339
Reanalysis of GSM505340
Reanalysis of GSM505341
Reanalysis of GSM505342
Reanalysis of GSM505343
Reanalysis of GSM505344
Reanalysis of GSM505345
Reanalysis of GSM505346
Reanalysis of GSM505347
Reanalysis of GSM505348
Reanalysis of GSM505349
Reanalysis of GSM505350
Reanalysis of GSM505351
Reanalysis of GSM505352
Reanalysis of GSM505353
Reanalysis of GSM505354
Reanalysis of GSM505355
Reanalysis of GSM505356
Reanalysis of GSM505357
Reanalysis of GSM505358
Reanalysis of GSM505359
Reanalysis of GSM505360
Reanalysis of GSM505361
Reanalysis of GSM505362
Reanalysis of GSM505363
Reanalysis of GSM505364
Reanalysis of GSM505365
Reanalysis of GSM505366
Reanalysis of GSM505367
Reanalysis of GSM505368
Reanalysis of GSM505369
Reanalysis of GSM505370
Reanalysis of GSM505371
Reanalysis of GSM505372
Reanalysis of GSM505373
Reanalysis of GSM505374
Reanalysis of GSM505375
Reanalysis of GSM505376
Reanalysis of GSM505377
Reanalysis of GSM505378
Reanalysis of GSM505379
Reanalysis of GSM505380
Reanalysis of GSM505381
Reanalysis of GSM505382
Reanalysis of GSM505383
Reanalysis of GSM505384
Reanalysis of GSM505385
Reanalysis of GSM505386
Reanalysis of GSM505387
Reanalysis of GSM505388
Reanalysis of GSM505389
Reanalysis of GSM505390
Reanalysis of GSM505391
Reanalysis of GSM505392
Reanalysis of GSM505393
Reanalysis of GSM505394
Reanalysis of GSM505395
Reanalysis of GSM505396
Reanalysis of GSM505397
Reanalysis of GSM505398
Reanalysis of GSM505399
Reanalysis of GSM505400
Reanalysis of GSM505401
Reanalysis of GSM505402
Reanalysis of GSM505403
Reanalysis of GSM505404
Reanalysis of GSM505405
Reanalysis of GSM505406
Reanalysis of GSM505407
Reanalysis of GSM505408
Reanalysis of GSM505409
Reanalysis of GSM505410
Reanalysis of GSM505411
Reanalysis of GSM505412
Reanalysis of GSM505413
Reanalysis of GSM505414
Reanalysis of GSM505415
Reanalysis of GSM505416
Reanalysis of GSM505417
Reanalysis of GSM505418
Reanalysis of GSM505419
Reanalysis of GSM505420
Reanalysis of GSM505421
Reanalysis of GSM505422
Reanalysis of GSM505423
Reanalysis of GSM505424
Reanalysis of GSM505425
Reanalysis of GSM505426
Reanalysis of GSM505427
Reanalysis of GSM505428
Reanalysis of GSM505429
Reanalysis of GSM505430
Reanalysis of GSM505431
Reanalysis of GSM505432
Reanalysis of GSM505433
Reanalysis of GSM505434
Reanalysis of GSM505435
Reanalysis of GSM505436
Reanalysis of GSM505437
Reanalysis of GSM505438
Reanalysis of GSM505439
Reanalysis of GSM505440
Reanalysis of GSM505441
Reanalysis of GSM505442
Reanalysis of GSM505443
Reanalysis of GSM505444
Reanalysis of GSM505445
Reanalysis of GSM505446
Reanalysis of GSM505447
Reanalysis of GSM505448
Reanalysis of GSM505449
Reanalysis of GSM505450
Reanalysis of GSM505451
Reanalysis of GSM505452
Reanalysis of GSM505453
Reanalysis of GSM505454
Reanalysis of GSM505455
Reanalysis of GSM505456
Reanalysis of GSM505457
Reanalysis of GSM505458
Reanalysis of GSM505459
Reanalysis of GSM505460
Reanalysis of GSM505461
Reanalysis of GSM505462
Reanalysis of GSM505463
Reanalysis of GSM505464
Reanalysis of GSM505465
Reanalysis of GSM505466
Reanalysis of GSM505467
Reanalysis of GSM505468
Reanalysis of GSM505469
Reanalysis of GSM505470
Reanalysis of GSM505471
Reanalysis of GSM505472
Reanalysis of GSM505473
Reanalysis of GSM505474
Reanalysis of GSM505475
Reanalysis of GSM505476
Reanalysis of GSM505477
Reanalysis of GSM505478
Reanalysis of GSM505479
Reanalysis of GSM505480
Reanalysis of GSM505481
Reanalysis of GSM505482
Reanalysis of GSM505483
Reanalysis of GSM505484
Reanalysis of GSM505485
Reanalysis of GSM505486
Reanalysis of GSM505487
Reanalysis of GSM505488
Reanalysis of GSM505489
Reanalysis of GSM505490
Reanalysis of GSM505491
Reanalysis of GSM505492
Reanalysis of GSM505493
Reanalysis of GSM505494
Reanalysis of GSM505495
Reanalysis of GSM505496
Reanalysis of GSM505497
Reanalysis of GSM505498
Reanalysis of GSM505499
Reanalysis of GSM505500
Reanalysis of GSM505501
Reanalysis of GSM505502
Reanalysis of GSM505503
Reanalysis of GSM505504
Reanalysis of GSM505505
Reanalysis of GSM505506
Reanalysis of GSM505507
Reanalysis of GSM505508
Reanalysis of GSM505509
Reanalysis of GSM505510
Reanalysis of GSM505511
Reanalysis of GSM505512
Reanalysis of GSM505513
Reanalysis of GSM505514
Reanalysis of GSM505515
Reanalysis of GSM505516
Reanalysis of GSM505517
Reanalysis of GSM505518
Reanalysis of GSM505519
Reanalysis of GSM505520
Reanalysis of GSM505521
Reanalysis of GSM505522
Reanalysis of GSM505523
Reanalysis of GSM505524
Reanalysis of GSM505525
Reanalysis of GSM505526
Reanalysis of GSM505527
Reanalysis of GSM505528
Reanalysis of GSM505529
Reanalysis of GSM505530
Reanalysis of GSM505531
Reanalysis of GSM505532
Reanalysis of GSM505533
Reanalysis of GSM505534
Reanalysis of GSM505535
Reanalysis of GSM505536
Reanalysis of GSM505537
Reanalysis of GSM505538
Reanalysis of GSM505539
Reanalysis of GSM505540
Reanalysis of GSM505541
Reanalysis of GSM505542
Reanalysis of GSM505543
Reanalysis of GSM505544
Reanalysis of GSM505545
Reanalysis of GSM505546
Reanalysis of GSM505547
Reanalysis of GSM505548
Reanalysis of GSM505549
Reanalysis of GSM505550
Reanalysis of GSM505551
Reanalysis of GSM505552
Reanalysis of GSM505553
Reanalysis of GSM505554
Reanalysis of GSM505555
Reanalysis of GSM505556
Reanalysis of GSM505557
Reanalysis of GSM505558
Reanalysis of GSM505559
Reanalysis of GSM505560
Reanalysis of GSM505561
Reanalysis of GSM505562
Reanalysis of GSM505563
Reanalysis of GSM505564
Reanalysis of GSM505565
Reanalysis of GSM505566
Reanalysis of GSM505567
Reanalysis of GSM505568
Reanalysis of GSM505569
Reanalysis of GSM505570
Reanalysis of GSM505571
Reanalysis of GSM505572
Reanalysis of GSM505573
Reanalysis of GSM505574
Reanalysis of GSM505575
Reanalysis of GSM505576
Reanalysis of GSM505577
Reanalysis of GSM505578
Reanalysis of GSM505579
Reanalysis of GSM505580
Reanalysis of GSM505581
Reanalysis of GSM505582
Reanalysis of GSM505583
Reanalysis of GSM505584
Reanalysis of GSM505585
Reanalysis of GSM505586
Reanalysis of GSM505587
Reanalysis of GSM505588
Reanalysis of GSM505589
Reanalysis of GSM505590
Reanalysis of GSM505591
Reanalysis of GSM505592
Reanalysis of GSM505593
Reanalysis of GSM505594
Reanalysis of GSM505595
Reanalysis of GSM505596
Reanalysis of GSM505597
Reanalysis of GSM505598
Reanalysis of GSM505599
Reanalysis of GSM505600
Reanalysis of GSM505601
Reanalysis of GSM505602
Reanalysis of GSM505603
Reanalysis of GSM505604
Reanalysis of GSM505605
Reanalysis of GSM508012
Reanalysis of GSM508013
Reanalysis of GSM508014
Reanalysis of GSM508015
Reanalysis of GSM508016
Reanalysis of GSM508017
Reanalysis of GSM508018
Reanalysis of GSM508019
Reanalysis of GSM508020
Reanalysis of GSM508021
Reanalysis of GSM508022
Reanalysis of GSM508023
Reanalysis of GSM508024
Reanalysis of GSM508025
Reanalysis of GSM508026
Reanalysis of GSM508027
Reanalysis of GSM508028
Reanalysis of GSM508029
Reanalysis of GSM508030
Reanalysis of GSM508031
Reanalysis of GSM508032
Reanalysis of GSM508033
Reanalysis of GSM508034
Reanalysis of GSM508035
Reanalysis of GSM508036
Reanalysis of GSM508037
Reanalysis of GSM508038
Reanalysis of GSM508039
Reanalysis of GSM508040
Reanalysis of GSM508041
Reanalysis of GSM508042
Reanalysis of GSM508043
Reanalysis of GSM508044
Reanalysis of GSM508045
Reanalysis of GSM508046
Reanalysis of GSM508047
Reanalysis of GSM508048
Reanalysis of GSM508049
Reanalysis of GSM508050
Reanalysis of GSM508051
Reanalysis of GSM508052
Reanalysis of GSM508053
Reanalysis of GSM508054
Reanalysis of GSM508055
Reanalysis of GSM508056
Reanalysis of GSM508057
Reanalysis of GSM508058
Reanalysis of GSM508059
Reanalysis of GSM508060
Reanalysis of GSM508061
Reanalysis of GSM508062
Reanalysis of GSM508063
Reanalysis of GSM508064
Reanalysis of GSM508065
Reanalysis of GSM508066
Reanalysis of GSM508067
Reanalysis of GSM508068
Reanalysis of GSM508069
Reanalysis of GSM508070
Reanalysis of GSM508071
Reanalysis of GSM508072
Reanalysis of GSM508073
Reanalysis of GSM508074
Reanalysis of GSM508075
Reanalysis of GSM508076
Reanalysis of GSM508077
Reanalysis of GSM508078
Reanalysis of GSM508079
Reanalysis of GSM508080
Reanalysis of GSM508081
Reanalysis of GSM508082
Reanalysis of GSM508083
Reanalysis of GSM508084
Reanalysis of GSM508085
Reanalysis of GSM508086
Reanalysis of GSM508087
Reanalysis of GSM508088
Reanalysis of GSM508089
Reanalysis of GSM508090
Reanalysis of GSM508091
Reanalysis of GSM508092
Reanalysis of GSM508093
Reanalysis of GSM508094
Reanalysis of GSM508095
Reanalysis of GSM508096
Reanalysis of GSM508097
Reanalysis of GSM508098
Reanalysis of GSM508099
Reanalysis of GSM508100
Reanalysis of GSM508101
Reanalysis of GSM508102
Reanalysis of GSM508103
Reanalysis of GSM508104
Reanalysis of GSM508105
Reanalysis of GSM508106
Reanalysis of GSM508107
Reanalysis of GSM508108
Reanalysis of GSM508109
Reanalysis of GSM508110
Reanalysis of GSM508111
Reanalysis of GSM508112
Reanalysis of GSM508113
Reanalysis of GSM508114
Reanalysis of GSM508115
Reanalysis of GSM508116
Reanalysis of GSM508117
Reanalysis of GSM508118
Reanalysis of GSM508119
Reanalysis of GSM508120
Reanalysis of GSM508121
Reanalysis of GSM508122
Reanalysis of GSM508123
Reanalysis of GSM508124
Reanalysis of GSM508125
Reanalysis of GSM508126
Reanalysis of GSM508127
Reanalysis of GSM508128
Reanalysis of GSM508129
Reanalysis of GSM508130
Reanalysis of GSM508131
Reanalysis of GSM508132
Reanalysis of GSM508133
Reanalysis of GSM508134
Reanalysis of GSM508135
Reanalysis of GSM508136
Reanalysis of GSM508137
Reanalysis of GSM508138
Reanalysis of GSM508139
Reanalysis of GSM508140
Reanalysis of GSM508141
Reanalysis of GSM508142
Reanalysis of GSM508143
Reanalysis of GSM508144
Reanalysis of GSM508145
Reanalysis of GSM508146
Reanalysis of GSM508147
Reanalysis of GSM508148
Reanalysis of GSM508149
Reanalysis of GSM508150
Reanalysis of GSM508151
Reanalysis of GSM508152
Reanalysis of GSM508153
Reanalysis of GSM508154
Reanalysis of GSM508155
Reanalysis of GSM508156
Reanalysis of GSM508157
Reanalysis of GSM508158
Reanalysis of GSM508159
Reanalysis of GSM508160
Reanalysis of GSM508161
Reanalysis of GSM508162
Reanalysis of GSM508163
Reanalysis of GSM508164
Reanalysis of GSM508165
Reanalysis of GSM508166
Reanalysis of GSM508167
Reanalysis of GSM508168
Reanalysis of GSM508169
Reanalysis of GSM508170
Reanalysis of GSM508171
Reanalysis of GSM508172
Reanalysis of GSM508173
Reanalysis of GSM508174
Reanalysis of GSM508175
Reanalysis of GSM508176
Reanalysis of GSM508177
Reanalysis of GSM508178
Reanalysis of GSM508179
Reanalysis of GSM508180
Reanalysis of GSM508181
Reanalysis of GSM508182
Reanalysis of GSM508183
Reanalysis of GSM508184
Reanalysis of GSM508185
Reanalysis of GSM508186
Reanalysis of GSM508187
Reanalysis of GSM508188
Reanalysis of GSM508189
Reanalysis of GSM158188
Reanalysis of GSM158189
Reanalysis of GSM158190
Reanalysis of GSM158191
Reanalysis of GSM158192
Reanalysis of GSM158193
Reanalysis of GSM158194
Reanalysis of GSM158195
Reanalysis of GSM158196
Reanalysis of GSM158197
Reanalysis of GSM158198
Reanalysis of GSM158199
Reanalysis of GSM158200
Reanalysis of GSM158201
Reanalysis of GSM158202
Reanalysis of GSM158203
Reanalysis of GSM158204
Reanalysis of GSM158205
Reanalysis of GSM158206
Reanalysis of GSM158207
Reanalysis of GSM158208
Reanalysis of GSM158209
Reanalysis of GSM158210
Reanalysis of GSM158211
Reanalysis of GSM158212
Reanalysis of GSM158213
Reanalysis of GSM158214
Reanalysis of GSM158215
Reanalysis of GSM158216
Reanalysis of GSM158217
Reanalysis of GSM158218
Reanalysis of GSM158219
Reanalysis of GSM158220
Reanalysis of GSM158221
Reanalysis of GSM158222
Reanalysis of GSM158223
Reanalysis of GSM158224
Reanalysis of GSM158225
Reanalysis of GSM158226
Reanalysis of GSM158227
Reanalysis of GSM158228
Reanalysis of GSM158229
Reanalysis of GSM158230
Reanalysis of GSM158231
Reanalysis of GSM158232
Reanalysis of GSM158233
Reanalysis of GSM158234
Reanalysis of GSM158235
Reanalysis of GSM158236
Reanalysis of GSM158237
Reanalysis of GSM158238
Reanalysis of GSM158239
Reanalysis of GSM158240
Reanalysis of GSM158241
Reanalysis of GSM158242
Reanalysis of GSM158243
Reanalysis of GSM158244
Reanalysis of GSM158245
Reanalysis of GSM158246
Reanalysis of GSM158247
Reanalysis of GSM158248
Reanalysis of GSM158249
Reanalysis of GSM158250
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Reanalysis of GSM508516
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Reanalysis of GSM1100037
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Reanalysis of GSM107986
Reanalysis of GSM139539
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Reanalysis of GSM1982110
Reanalysis of GSM1982111
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Reanalysis of GSM706202
Reanalysis of GSM706687
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Reanalysis of GSM706692
Reanalysis of GSM706699
Reanalysis of GSM706703
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Reanalysis of GSM707600
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Reanalysis of GSM710497
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Reanalysis of GSM710555
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Reanalysis of GSM710633
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Reanalysis of GSM411235
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Reanalysis of GSM4275321
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Reanalysis of GSM4275325
Reanalysis of GSM4275326
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Reanalysis of GSM4275330
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Reanalysis of GSM4275333
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Reanalysis of GSM4275336
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Reanalysis of GSM4275341
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Reanalysis of GSM4275345
Reanalysis of GSM4275346
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Reanalysis of GSM4275350
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Reanalysis of GSM4275357
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Reanalysis of GSM4275360
Reanalysis of GSM4275361
Reanalysis of GSM4275362
Reanalysis of GSM4275363
Reanalysis of GSM4275364

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE205568_combat_corrected.tar.gz 69.9 Mb (ftp)(http) TAR
GSE205568_mad-quantile_corrected.tar.gz 62.0 Mb (ftp)(http) TAR
GSE205568_matrix_table.tsv.gz 61.5 Mb (ftp)(http) TSV
GSE205568_non_corrected.tar.gz 74.3 Mb (ftp)(http) TAR
GSE205568_quantile_corrected.tar.gz 61.9 Mb (ftp)(http) TAR
Processed data are available on Series record

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