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Sample GSM139544 Query DataSets for GSM139544
Status Public on Dec 19, 2008
Title HB07
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.4881088293806
117_3p_at 7.77649891077653
1494_3p_f_at 7.58698930090225
1552275_3p_s_at 7.97212553392778
1552281_3p_at 9.25412278137418
1552296_3p_at 5.6106083581354
1552302_3p_at 5.8159252346796
1552311_3p_a_at 8.22570926513451
1552321_3p_a_at 5.12543158129142
1552340_3p_at 6.77009481654018
1552343_3p_s_at 7.20879224729046
1552354_3p_at 7.68852830847973
1552476_3p_s_at 8.06711261114181
1552480_3p_s_at 3.56576005689936
1552504_3p_a_at 7.87963452024324
1552518_3p_s_at 5.111805309168
1552528_3p_at 8.00640668046604
1552535_3p_at 7.89179164615959
1552566_3p_at 6.60056177304892
1552575_3p_a_at 7.6355203837555

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139544.cel.gz 8.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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