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Sample GSM139547 Query DataSets for GSM139547
Status Public on Dec 19, 2008
Title HB10
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pp
Size: T2
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 10.3725660408684
117_3p_at 8.16141901523922
1494_3p_f_at 7.34275592799902
1552275_3p_s_at 8.16704107926546
1552281_3p_at 9.21004432372219
1552296_3p_at 7.35235327673423
1552302_3p_at 5.60049611997823
1552311_3p_a_at 8.00226608985407
1552321_3p_a_at 4.54958112464857
1552340_3p_at 6.5540761720967
1552343_3p_s_at 7.03525051718297
1552354_3p_at 7.23505936587294
1552476_3p_s_at 7.53444293766111
1552480_3p_s_at 3.75876177982687
1552504_3p_a_at 7.47189720120078
1552518_3p_s_at 6.47787993945904
1552528_3p_at 8.19285329802917
1552535_3p_at 7.95341671871972
1552566_3p_at 6.9873891953216
1552575_3p_a_at 8.3924927876591

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139547.cel.gz 8.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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