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Sample GSM139549 Query DataSets for GSM139549
Status Public on Dec 19, 2008
Title HB12
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.2449069739571
117_3p_at 7.58570483778022
1494_3p_f_at 7.80755080107285
1552275_3p_s_at 7.75639336826789
1552281_3p_at 9.36365838529864
1552296_3p_at 6.05996766232525
1552302_3p_at 5.80893436362195
1552311_3p_a_at 8.15369473944516
1552321_3p_a_at 4.42171936208316
1552340_3p_at 6.43870477959187
1552343_3p_s_at 7.57683273279212
1552354_3p_at 7.11496493365624
1552476_3p_s_at 7.30413662481553
1552480_3p_s_at 3.52053179933042
1552504_3p_a_at 7.22132827981376
1552518_3p_s_at 5.12766491465655
1552528_3p_at 8.20934645709852
1552535_3p_at 7.88333121722615
1552566_3p_at 6.58516770331261
1552575_3p_a_at 7.38060208353417

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139549.cel.gz 8.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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