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Sample GSM139552 Query DataSets for GSM139552
Status Public on Dec 19, 2008
Title HB15
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.48965044568848
117_3p_at 8.03888770544814
1494_3p_f_at 7.28654153369418
1552275_3p_s_at 7.56921918046415
1552281_3p_at 9.14405715560415
1552296_3p_at 6.27060545503198
1552302_3p_at 5.80176307796427
1552311_3p_a_at 8.31861662459904
1552321_3p_a_at 4.77396127027075
1552340_3p_at 6.53788986799498
1552343_3p_s_at 7.4818318737591
1552354_3p_at 7.78040278550231
1552476_3p_s_at 7.79453631022093
1552480_3p_s_at 3.41011622619501
1552504_3p_a_at 7.57053864215603
1552518_3p_s_at 6.49844076689984
1552528_3p_at 8.18223675094459
1552535_3p_at 8.00770593838395
1552566_3p_at 6.56400093386288
1552575_3p_a_at 7.93241850646851

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139552.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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