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Sample GSM139554 Query DataSets for GSM139554
Status Public on Dec 19, 2008
Title HB17
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.21356433810366
117_3p_at 7.69341450442348
1494_3p_f_at 7.4761999381468
1552275_3p_s_at 7.47354233690953
1552281_3p_at 9.14246392866238
1552296_3p_at 5.84569214928544
1552302_3p_at 6.20124416649938
1552311_3p_a_at 8.37478345767657
1552321_3p_a_at 4.66234666225808
1552340_3p_at 6.44078155360987
1552343_3p_s_at 7.48379061801533
1552354_3p_at 7.42567490385548
1552476_3p_s_at 7.65384314955817
1552480_3p_s_at 3.79122692100026
1552504_3p_a_at 7.66211946802806
1552518_3p_s_at 6.36867348907652
1552528_3p_at 8.3850658058515
1552535_3p_at 7.95409172037296
1552566_3p_at 6.41877553082022
1552575_3p_a_at 7.64600230465587

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139554.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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