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GEO accession:
Sample GSM139557
Query DataSets for GSM139557
Status
Public on Dec 19, 2008
Title
HB20
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.19248309481995
117_3p_at
7.54553612389994
1494_3p_f_at
7.65861621642827
1552275_3p_s_at
6.78860544583193
1552281_3p_at
9.34752968909074
1552296_3p_at
6.81375070734752
1552302_3p_at
6.24295171493232
1552311_3p_a_at
8.48737861696673
1552321_3p_a_at
4.80151064816124
1552340_3p_at
6.67966431325669
1552343_3p_s_at
7.33596261669035
1552354_3p_at
8.06309230288104
1552476_3p_s_at
8.0921839229719
1552480_3p_s_at
3.6115609481038
1552504_3p_a_at
7.95491885381381
1552518_3p_s_at
5.65896780132645
1552528_3p_at
8.3323621978099
1552535_3p_at
8.23398800841127
1552566_3p_at
6.45069238535647
1552575_3p_a_at
7.6858706879883
Total number of rows:
61297
Table truncated, full table size
2186 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139557.cel.gz
8.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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