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GEO accession:
Sample GSM139561
Query DataSets for GSM139561
Status
Public on Dec 19, 2008
Title
HB24
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T1
Node: N2
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.86637995469018
117_3p_at
7.59346941950212
1494_3p_f_at
7.41426165888697
1552275_3p_s_at
7.09591604523604
1552281_3p_at
9.3564916264718
1552296_3p_at
5.73012672757088
1552302_3p_at
5.85533319511728
1552311_3p_a_at
8.34619604998148
1552321_3p_a_at
4.5045602275911
1552340_3p_at
6.75357009924763
1552343_3p_s_at
7.96183847236536
1552354_3p_at
7.02227566104684
1552476_3p_s_at
7.34559684317498
1552480_3p_s_at
3.51454808428079
1552504_3p_a_at
7.70463309541308
1552518_3p_s_at
5.2345017356886
1552528_3p_at
8.34013182229156
1552535_3p_at
7.93400556571785
1552566_3p_at
6.8520304654503
1552575_3p_a_at
8.44252980051958
Total number of rows:
61297
Table truncated, full table size
2186 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139561.cel.gz
8.5 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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