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Sample GSM139565 Query DataSets for GSM139565
Status Public on Dec 19, 2008
Title HB28
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.85318259635733
117_3p_at 7.38900743585637
1494_3p_f_at 7.40793829423136
1552275_3p_s_at 8.21969756296466
1552281_3p_at 9.17707037913667
1552296_3p_at 5.32874486409366
1552302_3p_at 5.67876103672271
1552311_3p_a_at 8.18655893185081
1552321_3p_a_at 4.38981557218307
1552340_3p_at 6.49347079867398
1552343_3p_s_at 7.53317917525483
1552354_3p_at 7.11228712245796
1552476_3p_s_at 7.70184834392959
1552480_3p_s_at 3.48301116582204
1552504_3p_a_at 7.36335842815541
1552518_3p_s_at 5.6806116449556
1552528_3p_at 8.35189910538158
1552535_3p_at 7.8376413893696
1552566_3p_at 6.53965191918606
1552575_3p_a_at 8.6217286843993

Total number of rows: 61297

Table truncated, full table size 2187 Kbytes.




Supplementary file Size Download File type/resource
gsm139565.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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