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GEO accession:
Sample GSM139570
Query DataSets for GSM139570
Status
Public on Dec 19, 2008
Title
HB33
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.8232662091498
117_3p_at
8.40617960006965
1494_3p_f_at
7.45709833554746
1552275_3p_s_at
7.89710332747636
1552281_3p_at
9.36133184178611
1552296_3p_at
5.53018805270533
1552302_3p_at
6.40028124580137
1552311_3p_a_at
8.20182290423606
1552321_3p_a_at
4.64576127829961
1552340_3p_at
6.94800621956775
1552343_3p_s_at
7.3514147982643
1552354_3p_at
7.0399733228715
1552476_3p_s_at
7.68184203254627
1552480_3p_s_at
3.31020815826836
1552504_3p_a_at
7.65280447283065
1552518_3p_s_at
6.1230873016629
1552528_3p_at
8.52832640210196
1552535_3p_at
7.95417296030079
1552566_3p_at
6.89542514963535
1552575_3p_a_at
7.35231399394063
Total number of rows:
61297
Table truncated, full table size
2186 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139570.cel.gz
8.5 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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