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Sample GSM139571 Query DataSets for GSM139571
Status Public on Dec 19, 2008
Title HB34
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.79984092694836
117_3p_at 7.77490575651803
1494_3p_f_at 7.46902120995249
1552275_3p_s_at 7.85897125093122
1552281_3p_at 9.26670180937393
1552296_3p_at 5.98266766915561
1552302_3p_at 6.29422732721039
1552311_3p_a_at 8.29699609675084
1552321_3p_a_at 4.94958242929827
1552340_3p_at 6.70905982130547
1552343_3p_s_at 6.78621780414522
1552354_3p_at 7.73461276737924
1552476_3p_s_at 7.79899510043212
1552480_3p_s_at 3.6698150009757
1552504_3p_a_at 7.80237803267461
1552518_3p_s_at 5.65806184626269
1552528_3p_at 8.02848987840601
1552535_3p_at 7.88684217851153
1552566_3p_at 6.3456825138854
1552575_3p_a_at 7.9905868941292

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139571.cel.gz 8.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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