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GEO accession:
Sample GSM139572
Query DataSets for GSM139572
Status
Public on Dec 19, 2008
Title
HB35
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N1
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.87463247438406
117_3p_at
7.92012865569103
1494_3p_f_at
7.45145057103438
1552275_3p_s_at
7.25567747391041
1552281_3p_at
9.2045393696826
1552296_3p_at
5.91817898216435
1552302_3p_at
6.27960669311227
1552311_3p_a_at
8.26985246529649
1552321_3p_a_at
4.68808954399791
1552340_3p_at
6.79459412011381
1552343_3p_s_at
7.78546475813694
1552354_3p_at
8.03551199374088
1552476_3p_s_at
7.92171351708188
1552480_3p_s_at
3.66865446420534
1552504_3p_a_at
7.73520937257402
1552518_3p_s_at
5.69286098229998
1552528_3p_at
8.1764168413781
1552535_3p_at
7.7864996862811
1552566_3p_at
6.56030062487727
1552575_3p_a_at
7.62233220768136
Total number of rows:
61297
Table truncated, full table size
2186 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139572.cel.gz
8.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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