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Sample GSM139573 Query DataSets for GSM139573
Status Public on Dec 19, 2008
Title HB36
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.34446511242428
117_3p_at 7.8556254094197
1494_3p_f_at 7.27227483728293
1552275_3p_s_at 8.1713210742169
1552281_3p_at 8.91541201180723
1552296_3p_at 6.09676372406651
1552302_3p_at 6.09245844453845
1552311_3p_a_at 8.21248501313547
1552321_3p_a_at 5.00297171703605
1552340_3p_at 6.37959239064393
1552343_3p_s_at 7.30952956421503
1552354_3p_at 7.61597478157504
1552476_3p_s_at 7.65364226101866
1552480_3p_s_at 4.61478036617704
1552504_3p_a_at 7.66618392730578
1552518_3p_s_at 5.68433632237157
1552528_3p_at 7.95392565751098
1552535_3p_at 7.84016081560364
1552566_3p_at 6.5431328074581
1552575_3p_a_at 7.65892103478226

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139573.cel.gz 8.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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