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Sample GSM139585 Query DataSets for GSM139585
Status Public on Dec 19, 2008
Title HB48
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.58718741920326
117_3p_at 7.65960306389116
1494_3p_f_at 9.01254882895748
1552275_3p_s_at 8.19358157093043
1552281_3p_at 9.2531199706972
1552296_3p_at 5.79251310047949
1552302_3p_at 6.25647352410643
1552311_3p_a_at 8.33899159718637
1552321_3p_a_at 5.43688723810911
1552340_3p_at 6.82877352600369
1552343_3p_s_at 6.67227580427276
1552354_3p_at 7.86303778675179
1552476_3p_s_at 7.928860463048
1552480_3p_s_at 3.39195255071233
1552504_3p_a_at 7.70676149913723
1552518_3p_s_at 5.37994957721219
1552528_3p_at 8.07219302162405
1552535_3p_at 7.89803606385947
1552566_3p_at 6.56614778444395
1552575_3p_a_at 7.85572090622368

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139585.cel.gz 8.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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