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Sample GSM139588 Query DataSets for GSM139588
Status Public on Dec 19, 2008
Title HB51
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.36342013888381
117_3p_at 7.9358779461193
1494_3p_f_at 7.48194632012247
1552275_3p_s_at 7.71432433028449
1552281_3p_at 9.13264251505173
1552296_3p_at 6.01698154376725
1552302_3p_at 6.48277746922997
1552311_3p_a_at 8.36467764198794
1552321_3p_a_at 4.9132199598057
1552340_3p_at 6.4246614694657
1552343_3p_s_at 7.23348985953966
1552354_3p_at 7.48735011914804
1552476_3p_s_at 7.72905722526105
1552480_3p_s_at 3.61411929755343
1552504_3p_a_at 7.55546780453199
1552518_3p_s_at 5.31246194927201
1552528_3p_at 8.05850496464374
1552535_3p_at 7.88018209897215
1552566_3p_at 6.25793419364026
1552575_3p_a_at 7.85889171369693

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139588.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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