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GEO accession:
Sample GSM139591
Query DataSets for GSM139591
Status
Public on Dec 19, 2008
Title
HB54
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N2
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.2898434177105
117_3p_at
7.5601250137937
1494_3p_f_at
7.54284169771709
1552275_3p_s_at
8.05646739205778
1552281_3p_at
9.31601274567803
1552296_3p_at
6.43178839127727
1552302_3p_at
6.65868975669962
1552311_3p_a_at
8.10431166015255
1552321_3p_a_at
5.00196342234886
1552340_3p_at
6.58230709290876
1552343_3p_s_at
7.59340906478602
1552354_3p_at
6.88521628614609
1552476_3p_s_at
7.75115585293345
1552480_3p_s_at
3.58642930317328
1552504_3p_a_at
7.49181625307039
1552518_3p_s_at
5.75569244407547
1552528_3p_at
8.52089925854978
1552535_3p_at
7.95988026134422
1552566_3p_at
6.49825114712598
1552575_3p_a_at
7.4049286462368
Total number of rows:
61297
Table truncated, full table size
2186 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139591.cel.gz
8.4 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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