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Sample GSM139592 Query DataSets for GSM139592
Status Public on Dec 19, 2008
Title HB55
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 10.2938744122101
117_3p_at 8.9844598650574
1494_3p_f_at 7.39624337670628
1552275_3p_s_at 7.33168765946466
1552281_3p_at 9.39085075269553
1552296_3p_at 6.33893509536896
1552302_3p_at 5.58597902846392
1552311_3p_a_at 8.31579700400644
1552321_3p_a_at 4.28937604138194
1552340_3p_at 6.59632282606064
1552343_3p_s_at 7.3813749902378
1552354_3p_at 7.33387917196095
1552476_3p_s_at 7.66862514360655
1552480_3p_s_at 3.55090954244732
1552504_3p_a_at 7.44785153862903
1552518_3p_s_at 5.91968569129785
1552528_3p_at 8.23280761986679
1552535_3p_at 8.03586346690157
1552566_3p_at 6.5383221138616
1552575_3p_a_at 8.86826338539415

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139592.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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