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GEO accession:
Sample GSM139608
Query DataSets for GSM139608
Status
Public on Dec 19, 2008
Title
HB71
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N0
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.96937360280713
117_3p_at
8.00285897234602
1494_3p_f_at
7.46450527148366
1552275_3p_s_at
7.58453807114695
1552281_3p_at
9.09451025816274
1552296_3p_at
6.21339455098473
1552302_3p_at
6.15026017277605
1552311_3p_a_at
8.3664430257595
1552321_3p_a_at
4.48048874373079
1552340_3p_at
6.93754902079193
1552343_3p_s_at
8.74241357757693
1552354_3p_at
7.38389349239204
1552476_3p_s_at
7.14355768337171
1552480_3p_s_at
3.70068330998434
1552504_3p_a_at
7.4950047786558
1552518_3p_s_at
6.3341194569807
1552528_3p_at
8.31039575647533
1552535_3p_at
7.66613764281511
1552566_3p_at
6.45648111354439
1552575_3p_a_at
8.24795238330926
Total number of rows:
61297
Table truncated, full table size
2186 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139608.cel.gz
8.5 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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