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GEO accession:
Sample GSM139629
Query DataSets for GSM139629
Status
Public on Dec 19, 2008
Title
HB92
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.39548108325215
117_3p_at
7.58023467734619
1494_3p_f_at
7.71051036811117
1552275_3p_s_at
7.50110203563772
1552281_3p_at
9.29379960509933
1552296_3p_at
5.76115990633981
1552302_3p_at
6.05218759444162
1552311_3p_a_at
8.1731244819397
1552321_3p_a_at
4.85108030988509
1552340_3p_at
6.59232621091607
1552343_3p_s_at
7.05572112120681
1552354_3p_at
7.7979831859686
1552476_3p_s_at
7.77144315370027
1552480_3p_s_at
3.87153809486905
1552504_3p_a_at
7.88840064248888
1552518_3p_s_at
5.69506898664727
1552528_3p_at
8.08743170557909
1552535_3p_at
7.91879185451161
1552566_3p_at
6.42040488355147
1552575_3p_a_at
8.33736496744356
Total number of rows:
61297
Table truncated, full table size
2186 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139629.cel.gz
8.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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