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Sample GSM1569200 Query DataSets for GSM1569200
Status Public on Jan 01, 2017
Title Ji_Batch6_29
Sample type RNA
 
Source name blood_Male_day0
Organism Homo sapiens
Characteristics tissue: whole blood
time point: day 0 (before vaccination)
Sex: Male
age: 21.175
race: Caucasian or White
Treatment protocol Affy_3_ivt_express_kit_manual_primeview.pdf
Growth protocol asm_userguide_genechip_primeview_human_gene_exp_array.pdf
Extracted molecule total RNA
Extraction protocol protocol_RNAextraction_PAXgene_HIMC030911.pdf
Label biotin
Label protocol asm_userguide_genechip_primeview_human_gene_exp_array.pdf
 
Hybridization protocol hyb_expression_analysis_technical_manual.pdf
Scan protocol wash_stain_scan_cartridge_arrays_manual.pdf
Description STANSUB_SLVP021-049-2012
Baseline (day 0)
whole blood transcripts
protocol manuals are available on the series record
Data processing Genespring GX 12.6., RMA normalization: median of all samples
 
Submission date Dec 19, 2014
Last update date Jan 01, 2017
Contact name weiqi wang
E-mail(s) weiqi.wang1983@gmail.com
Organization name stanford
Street address 1291 welch road
City palo alto
State/province ca
ZIP/Postal code 94305
Country USA
 
Platform ID GPL15207
Series (1)
GSE64361 Plasmablast response to influenza vaccines - 2012

Data table header descriptions
ID_REF
VALUE Normalized signal

Data table
ID_REF VALUE
AFFX-BioB-5_at -0.09760761
AFFX-BioB-M_at 0.1570425
AFFX-BioB-3_at 0.20748901
AFFX-BioC-5_at 0.13726234
AFFX-BioC-3_at 0.20437431
AFFX-BioDn-5_at 0.037923813
AFFX-BioDn-3_at 0.21403694
AFFX-CreX-5_at -0.011335373
AFFX-CreX-3_at -0.012084961
AFFX-DapX-5_at 0.972167
AFFX-DapX-M_at 0.5408802
AFFX-DapX-3_at 0.3690195
AFFX-LysX-5_at 0.7858658
AFFX-LysX-M_at 0.88699913
AFFX-LysX-3_at 0.78584003
AFFX-PheX-5_at 0.8827677
AFFX-PheX-M_at 0.856822
AFFX-PheX-3_at 0.7912016
AFFX-ThrX-5_at 1.1971388
AFFX-ThrX-M_at 0.9046612

Total number of rows: 49395

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1569200_Ji_Batch6_29_PrimeView_.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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