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Sample GSM1569201 Query DataSets for GSM1569201
Status Public on Jan 01, 2017
Title Ji_Batch6_50
Sample type RNA
 
Source name blood_Female_day0
Organism Homo sapiens
Characteristics tissue: whole blood
time point: day 0 (before vaccination)
Sex: Female
age: 25.843
race: Caucasian or White
Treatment protocol Affy_3_ivt_express_kit_manual_primeview.pdf
Growth protocol asm_userguide_genechip_primeview_human_gene_exp_array.pdf
Extracted molecule total RNA
Extraction protocol protocol_RNAextraction_PAXgene_HIMC030911.pdf
Label biotin
Label protocol asm_userguide_genechip_primeview_human_gene_exp_array.pdf
 
Hybridization protocol hyb_expression_analysis_technical_manual.pdf
Scan protocol wash_stain_scan_cartridge_arrays_manual.pdf
Description STANSUB_SLVP021-052-2012
Baseline (day 0)
whole blood transcripts
protocol manuals are available on the series record
Data processing Genespring GX 12.6., RMA normalization: median of all samples
 
Submission date Dec 19, 2014
Last update date Jan 01, 2017
Contact name weiqi wang
E-mail(s) weiqi.wang1983@gmail.com
Organization name stanford
Street address 1291 welch road
City palo alto
State/province ca
ZIP/Postal code 94305
Country USA
 
Platform ID GPL15207
Series (1)
GSE64361 Plasmablast response to influenza vaccines - 2012

Data table header descriptions
ID_REF
VALUE Normalized signal

Data table
ID_REF VALUE
AFFX-BioB-5_at -0.04845476
AFFX-BioB-M_at -0.03169346
AFFX-BioB-3_at -0.01389122
AFFX-BioC-5_at -0.003956795
AFFX-BioC-3_at -0.027647018
AFFX-BioDn-5_at -0.04738331
AFFX-BioDn-3_at -0.044053078
AFFX-CreX-5_at 0.011335373
AFFX-CreX-3_at 0.020493507
AFFX-DapX-5_at 0.8265867
AFFX-DapX-M_at 0.4757967
AFFX-DapX-3_at 0.47133255
AFFX-LysX-5_at 0.92325306
AFFX-LysX-M_at 0.7975235
AFFX-LysX-3_at 0.6863632
AFFX-PheX-5_at 0.8630352
AFFX-PheX-M_at 0.8359537
AFFX-PheX-3_at 0.72840405
AFFX-ThrX-5_at 0.7034559
AFFX-ThrX-M_at 0.8746691

Total number of rows: 49395

Table truncated, full table size 1211 Kbytes.




Supplementary file Size Download File type/resource
GSM1569201_Ji_Batch6_50_PrimeView_.CEL.gz 2.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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