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Sample GSM1569210 Query DataSets for GSM1569210
Status Public on Jan 01, 2017
Title Ji_Batch6_39
Sample type RNA
 
Source name blood_Female_day0
Organism Homo sapiens
Characteristics tissue: whole blood
time point: day 0 (before vaccination)
Sex: Female
age: 20.512
race: Decline to answer
Treatment protocol Affy_3_ivt_express_kit_manual_primeview.pdf
Growth protocol asm_userguide_genechip_primeview_human_gene_exp_array.pdf
Extracted molecule total RNA
Extraction protocol protocol_RNAextraction_PAXgene_HIMC030911.pdf
Label biotin
Label protocol asm_userguide_genechip_primeview_human_gene_exp_array.pdf
 
Hybridization protocol hyb_expression_analysis_technical_manual.pdf
Scan protocol wash_stain_scan_cartridge_arrays_manual.pdf
Description STANSUB_SLVP021-087-2012
Baseline (day 0)
whole blood transcripts
protocol manuals are available on the series record
Data processing Genespring GX 12.6., RMA normalization: median of all samples
 
Submission date Dec 19, 2014
Last update date Jan 01, 2017
Contact name weiqi wang
E-mail(s) weiqi.wang1983@gmail.com
Organization name stanford
Street address 1291 welch road
City palo alto
State/province ca
ZIP/Postal code 94305
Country USA
 
Platform ID GPL15207
Series (1)
GSE64361 Plasmablast response to influenza vaccines - 2012

Data table header descriptions
ID_REF
VALUE Normalized signal

Data table
ID_REF VALUE
AFFX-BioB-5_at -0.026305676
AFFX-BioB-M_at -0.13481236
AFFX-BioB-3_at -0.18415928
AFFX-BioC-5_at -0.053642273
AFFX-BioC-3_at -0.005787849
AFFX-BioDn-5_at -0.021969795
AFFX-BioDn-3_at -0.004041672
AFFX-CreX-5_at 0.068743706
AFFX-CreX-3_at 0.024482727
AFFX-DapX-5_at 0.40200806
AFFX-DapX-M_at 0.27502155
AFFX-DapX-3_at 0.18263817
AFFX-LysX-5_at 0.2352314
AFFX-LysX-M_at 0.23208427
AFFX-LysX-3_at 0.22361183
AFFX-PheX-5_at 0.30539513
AFFX-PheX-M_at 0.29963303
AFFX-PheX-3_at 0.2135334
AFFX-ThrX-5_at 0.24479198
AFFX-ThrX-M_at 0.33877563

Total number of rows: 49395

Table truncated, full table size 1217 Kbytes.




Supplementary file Size Download File type/resource
GSM1569210_Ji_Batch6_39_PrimeView_.CEL.gz 2.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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