GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158302
Query DataSets for GSM158302
Status
Public on Nov 23, 2007
Title
HB115
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
npCR - no pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.27989932594683
117_3p_at
8.6519937699413
1494_3p_f_at
7.28854628281245
1552275_3p_s_at
8.01864316384615
1552281_3p_at
9.45733875746207
1552296_3p_at
6.25734493402473
1552302_3p_at
5.79633761659266
1552311_3p_a_at
8.41950771216815
1552321_3p_a_at
4.68609002575041
1552340_3p_at
6.66103112353916
1552343_3p_s_at
6.88151006296307
1552354_3p_at
7.74117975894985
1552476_3p_s_at
8.07191778214169
1552480_3p_s_at
3.96590797704318
1552504_3p_a_at
7.49473458144192
1552518_3p_s_at
5.83356952493858
1552528_3p_at
8.26168383199091
1552535_3p_at
7.71421808327378
1552566_3p_at
6.83533983186427
1552575_3p_a_at
7.57707746248045
Total number of rows:
61359
Table truncated, full table size
2190 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158302.CEL.gz
8.9 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
