GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158340
Query DataSets for GSM158340
Status
Public on Nov 23, 2007
Title
HB155
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
npCR - no pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.51218337694601
117_3p_at
7.61920485841942
1494_3p_f_at
7.42250150999459
1552275_3p_s_at
8.0257034225215
1552281_3p_at
9.36601386593748
1552296_3p_at
5.73178482621432
1552302_3p_at
5.90891975815075
1552311_3p_a_at
8.05620911498846
1552321_3p_a_at
4.94667483432442
1552340_3p_at
6.71175922043255
1552343_3p_s_at
6.77924145426567
1552354_3p_at
8.18904142441166
1552476_3p_s_at
8.2027096265327
1552480_3p_s_at
3.83969681108941
1552504_3p_a_at
7.36630782596324
1552518_3p_s_at
5.21824933328972
1552528_3p_at
8.29450848371619
1552535_3p_at
7.7270072089404
1552566_3p_at
6.80331718388431
1552575_3p_a_at
7.51313132830966
Total number of rows:
61359
Table truncated, full table size
2190 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158340.CEL.gz
9.0 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|