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Sample GSM1611651 Query DataSets for GSM1611651
Status Public on Apr 30, 2015
Title iPSCs derived using the BKSM polycistronic cassette #2
Sample type RNA
 
Source name BKSM-iPS
Organism Mus musculus
Characteristics strain background: Black6-129X1/SvJ
age: 2-3 month
gender: both female and male
cell type: induced pluripotent stem cells (iPSCs)
Growth protocol Cells were grown in ESC media or NSCs as described in the Online methods section
Extracted molecule total RNA
Extraction protocol RNA (Dnase treated) was islolated and extracted using the Rneasy Mini Kit (Qiagen).
Label biotin
Label protocol Labeling was done by the Partners Center for Personalized Genetic Medicine.
 
Hybridization protocol Hybridization was done by the Partners Center for Personalized Genetic Medicine.
Scan protocol Scanning was done by the Partners Center for Personalized Genetic Medicine.
Description BKSM-iPS#2
Data processing Data was processed using Expression Console software, the processing algorithm was RMA
 
Submission date Feb 16, 2015
Last update date Apr 30, 2015
Contact name Ori Bar-Nur
E-mail(s) ori.bar-nur@mail.huji.ac.il
Organization name Harvard University
Department Center of Regenerative medicine
Lab Hochedlinger
Street address 185 Cambridge st.
City Boston
State/province MA
ZIP/Postal code 02114
Country USA
 
Platform ID GPL16570
Series (1)
GSE65951 Lineage conversion induced by pluripotency factors involves transient passage through an iPSC stage

Data table header descriptions
ID_REF
VALUE normalized

Data table
ID_REF VALUE
17210850 7.573866542
17210852 8.670901524
17210855 1484.24136
17210869 1276.094982
17210883 16.15623353
17210887 385.8047244
17210904 24.85978648
17210912 370.0019336
17210947 14.04693044
17210953 15.03131164
17210984 387.7959698
17210994 10.20595301
17210996 12.17599697
17210998 7.819470945
17211000 123.5926381
17211004 186.2583122
17211023 26.72796327
17211033 17.96028079
17211043 145.5519139
17211066 15.30361946

Total number of rows: 41345

Table truncated, full table size 845 Kbytes.




Supplementary file Size Download File type/resource
GSM1611651_BKSM-iPS_2.CEL.gz 9.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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