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Sample GSM1700738 Query DataSets for GSM1700738
Status Public on May 03, 2016
Title F4/80+ cells from tumors implanted in wild, rep1
Sample type RNA
 
Source name F4/80+ cells from tumors implanted in wild
Organism Mus musculus
Characteristics genotype/variation: wild type
protocol: tumors implanted in wild type mouse
cell type: F4/80+ cells isolated from tumors
Extracted molecule total RNA
Extraction protocol RNA samples were prepared using an RNAeasy kit (Qiagen) and hybridized using Affymetrix 1.0 ST Gene arrays.
Label biotin
Label protocol Standard Affymetrix protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description Gene expression data from macrophage-associated marker F4/80+ cells from tumors implanted in wild, rep1
YY1_wt1
Data processing Normalization are performed using robust multi-array analysis (RMA)
 
Submission date May 31, 2015
Last update date May 04, 2016
Contact name Hiromasa Morikawa
E-mail(s) hiromasa.morikawa@ki.se
Phone +46762923821
Organization name Karolinska Institutet
Department Medicine
Lab Unit of Computational Medicine
Street address Karolinska University Hospital, L8:05
City Stockholm
State/province Stockholms
ZIP/Postal code 171 76
Country Sweden
 
Platform ID GPL6246
Series (1)
GSE69402 Gene expression profile of F4/80+ cells isolated from tumors implanted in wild type and St2-/- mouse

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
10338001 11.83
10338002 6.1
10338003 9.97
10338004 8.55
10338005 2.54
10338006 2.73
10338007 2.99
10338008 3.5
10338009 7.52
10338010 2.55
10338011 5.43
10338012 2.67
10338013 2.41
10338014 2.47
10338015 2.47
10338016 7.25
10338017 13.07
10338018 6.59
10338019 5.13
10338020 7.61

Total number of rows: 35556

Table truncated, full table size 483 Kbytes.




Supplementary file Size Download File type/resource
GSM1700738_YY1_wt1_MoGene-1_0-st-v1_.CEL.gz 3.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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