|
| Status |
Public on Sep 24, 2015 |
| Title |
Whole blood CASE 5786073007_C |
| Sample type |
RNA |
| |
|
| Source name |
CASE
|
| Organism |
Homo sapiens |
| Characteristics |
disease status: CASE
Sex: Female
tissue: whole blood
|
| Extracted molecule |
total RNA |
| Extraction protocol |
PAXgene tubes were frozen at -20 °C after two hours at room temperature, until RNA was isolated using PAXgene extraction kits (Qiagen).
|
| Label |
biotin
|
| Label protocol |
tRNA was purified using QIAcube, and quantified with Agilent RNA 6000 nano kit
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Data processing |
Sample outliers (gender mismatches, duplicates and PC outliers) and probe outliers (non-autosomal and non-specific probes) were removed. Remaining data were quantile normalized and log2 transformed in R
|
| |
|
| Submission date |
Sep 23, 2015 |
| Last update date |
Sep 24, 2015 |
| Contact name |
Femke NG van 't Hof |
| E-mail(s) |
f.vanthof@umcutrecht.nl
|
| Organization name |
University medical center Utrecht
|
| Street address |
Heidelberglaan 100
|
| City |
Utrecht |
| ZIP/Postal code |
3584 CX |
| Country |
Netherlands |
| |
|
| Platform ID |
GPL10558 |
| Series (1) |
| GSE73378 |
Whole blood gene expression profiles of patients with a past aneurysmal subarachnoid hemorrhage |
|
