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Sample GSM192316 Query DataSets for GSM192316
Status Public on May 25, 2007
Title P3_AS_HepG2_RNuP+_C44_B1
Sample type RNA
 
Source name Total Nuclear RNA from HepG2 cell line
Organism Homo sapiens
Characteristics See publication for details
Biomaterial provider NCI
Extracted molecule polyA RNA
Extraction protocol Long RNA protocol - see publication for details
Label biotin
Label protocol See publication for details
 
Hybridization protocol See publication for details
Scan protocol See publication for details
Description See publication for details
Data processing See publication for details
 
Submission date May 23, 2007
Last update date Aug 02, 2007
Contact name Thomas R Gingeras
E-mail(s) tom_gingeras@affymetrix.com
Organization name Affymetrix, Inc.
Street address 3380 Central Expressway
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Platform ID GPL5277
Series (1)
GSE7576 RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription

Data table header descriptions
ID_REF CHIP_COORD_GENOMIC_COORD
VALUE intensity
ABS_CALL present/absent call

Data table
ID_REF VALUE ABS_CALL
x1422_y1333_chr10_5014263 23 A
x1705_y1421_chr10_5014268 22 A
x468_y1189_chr10_5014410 31.75 A
x2548_y797_chr10_5014413 32 A
x1013_y2115_chr10_5231259 -15 A
x348_y2485_chr10_5231264 -19.5 A
x1389_y663_chr10_8595654 44 A
x1609_y357_chr10_8595679 57.125 A
x2024_y809_chr10_8595684 56.75 A
x1071_y1_chr10_8595829 5 A
x2267_y101_chr10_8595903 171.5 A
x1201_y1121_chr10_8595908 186.5 A
x137_y699_chr10_8595913 184.5 A
x1915_y809_chr10_8595918 182.5 A
x1215_y1485_chr10_8596067 41.25 A
x1180_y633_chr10_8596162 34.5 A
x2146_y797_chr10_8596449 118 A
x1084_y1491_chr10_8596454 102.75 A
x290_y167_chr10_8596499 75 A
x1009_y251_chr10_8596504 74.75 A

Total number of rows: 2921035

Table truncated, full table size 89984 Kbytes.




Supplementary file Size Download File type/resource
GSM192316_1.CEL.bz2 22.1 Mb (ftp)(http) CEL
GSM192316_2.CEL.bz2 21.4 Mb (ftp)(http) CEL
GSM192316_3.CEL.bz2 21.5 Mb (ftp)(http) CEL
Processed data provided as supplementary file

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