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Sample GSM192406 Query DataSets for GSM192406
Status Public on May 25, 2007
Title P3_AS_HepG2_RNuP+_C74_B1
Sample type RNA
 
Source name Total Nuclear RNA from HepG2 cell line
Organism Homo sapiens
Characteristics See publication for details
Biomaterial provider NCI
Extracted molecule polyA RNA
Extraction protocol Long RNA protocol - see publication for details
Label biotin
Label protocol See publication for details
 
Hybridization protocol See publication for details
Scan protocol See publication for details
Description See publication for details
Data processing See publication for details
 
Submission date May 23, 2007
Last update date Aug 02, 2007
Contact name Thomas R Gingeras
E-mail(s) tom_gingeras@affymetrix.com
Organization name Affymetrix, Inc.
Street address 3380 Central Expressway
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Platform ID GPL5307
Series (1)
GSE7576 RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription

Data table header descriptions
ID_REF CHIP_COORD_GENOMIC_COORD
VALUE intensity
ABS_CALL present/absent call

Data table
ID_REF VALUE ABS_CALL
x2238_y817_chr10_1926089 4 A
x1328_y1709_chr10_1926094 5 A
x1326_y1967_chr10_1926099 2.75 A
x724_y1987_chr10_1926104 3 A
x649_y943_chr10_1926109 3.5 A
x2292_y1647_chr10_1926114 3.5 A
x2216_y547_chr10_1926119 2 A
x2199_y834_chr10_1926124 -1.5 A
x122_y2471_chr10_1926129 -2 A
x1029_y1963_chr10_1926134 2.5 A
x1032_y683_chr10_1926140 1.25 A
x2180_y707_chr10_1926145 1 A
x1014_y335_chr10_1926150 0 A
x1888_y909_chr10_1926155 -1.5 A
x2046_y53_chr10_1926160 2 P
x1256_y63_chr10_1926165 0 P
x901_y427_chr10_1926170 0.5 P
x369_y361_chr10_1926175 0.5 P
x1387_y969_chr10_1926180 5.5 P
x735_y697_chr10_2267941 363 P

Total number of rows: 3025329

Table truncated, full table size 92614 Kbytes.




Supplementary file Size Download File type/resource
GSM192406_1.CEL.bz2 22.5 Mb (ftp)(http) CEL
GSM192406_2.CEL.bz2 21.7 Mb (ftp)(http) CEL
GSM192406_3.CEL.bz2 21.5 Mb (ftp)(http) CEL
Processed data provided as supplementary file

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