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Sample GSM2038959 Query DataSets for GSM2038959
Status Public on Jan 20, 2016
Title SJETV021977
Sample type RNA
 
Source name Leukemia cells
Organism Homo sapiens
Characteristics source: bone marrow
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Hy5
Label protocol miRCURY Power labeling kit used according to manufacturer's (Exiqon) instructions
 
Hybridization protocol hybridization was done at 56 degrees Celsius for 16 hours followed by washing on an HS Pro instrument from Tecan.
Scan protocol Scanning was performed using an Agilent G2505B scanning system
Description processed signal intensity
Data processing raw counts were processed using the limma package(version 3.6.9) from Bioconductor
 
Submission date Jan 13, 2016
Last update date Jan 20, 2016
Contact name William Evans
E-mail(s) william.evans@stjude.org
Organization name St Jude Children's Research Hospital
Department Pharmaceutical Sciences
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL11434
Series (1)
GSE76849 miRNA from leukemia cells

Data table header descriptions
ID_REF
VALUE processed signal intensity

Data table
ID_REF VALUE
1100 9.518276513
4040 7.234525249
4390 7.199147931
4610 11.82686758
4700 8.264165495
5250 7.144694951
5730 7.215359208
5740 9.234027904
6880 7.346130451
9938 11.08669799
10138 10.71415336
10306 10.48926277
10899 7.199147931
10901 7.153621085
10902 7.105803409
10903 7.129179693
10904 7.53894161
10905 7.149493687
10906 7.122732884
10907 7.129179693

Total number of rows: 2666

Table truncated, full table size 47 Kbytes.




Supplementary file Size Download File type/resource
GSM2038959_14313022v60.gpr.gz 864.8 Kb (ftp)(http) GPR
Processed data included within Sample table

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