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Sample GSM2038964 Query DataSets for GSM2038964
Status Public on Jan 20, 2016
Title SJE2A067
Sample type RNA
 
Source name Leukemia cells
Organism Homo sapiens
Characteristics source: bone marrow
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Hy5
Label protocol miRCURY Power labeling kit used according to manufacturer's (Exiqon) instructions
 
Hybridization protocol hybridization was done at 56 degrees Celsius for 16 hours followed by washing on an HS Pro instrument from Tecan.
Scan protocol Scanning was performed using an Agilent G2505B scanning system
Description processed signal intensity
Data processing raw counts were processed using the limma package(version 3.6.9) from Bioconductor
 
Submission date Jan 13, 2016
Last update date Jan 20, 2016
Contact name William Evans
E-mail(s) william.evans@stjude.org
Organization name St Jude Children's Research Hospital
Department Pharmaceutical Sciences
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL11434
Series (1)
GSE76849 miRNA from leukemia cells

Data table header descriptions
ID_REF
VALUE processed signal intensity

Data table
ID_REF VALUE
1100 9.904513359
4040 7.206014621
4390 7.246211866
4610 8.131043719
4700 7.774235695
5250 7.192088781
5730 7.220525001
5740 9.426753514
6880 7.300666411
9938 10.94097744
10138 10.41023615
10306 9.00527445
10899 7.180444948
10901 7.158454596
10902 7.146392232
10903 7.083433327
10904 7.754390314
10905 7.152181902
10906 7.135883626
10907 7.16947337

Total number of rows: 2666

Table truncated, full table size 47 Kbytes.




Supplementary file Size Download File type/resource
GSM2038964_14313027v60.gpr.gz 845.1 Kb (ftp)(http) GPR
Processed data included within Sample table

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