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Sample GSM2038965 Query DataSets for GSM2038965
Status Public on Jan 20, 2016
Title SJETV021981
Sample type RNA
 
Source name Leukemia cells
Organism Homo sapiens
Characteristics source: bone marrow
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Hy5
Label protocol miRCURY Power labeling kit used according to manufacturer's (Exiqon) instructions
 
Hybridization protocol hybridization was done at 56 degrees Celsius for 16 hours followed by washing on an HS Pro instrument from Tecan.
Scan protocol Scanning was performed using an Agilent G2505B scanning system
Description processed signal intensity
Data processing raw counts were processed using the limma package(version 3.6.9) from Bioconductor
 
Submission date Jan 13, 2016
Last update date Jan 20, 2016
Contact name William Evans
E-mail(s) william.evans@stjude.org
Organization name St Jude Children's Research Hospital
Department Pharmaceutical Sciences
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL11434
Series (1)
GSE76849 miRNA from leukemia cells

Data table header descriptions
ID_REF
VALUE processed signal intensity

Data table
ID_REF VALUE
1100 10.02749389
4040 7.204866544
4390 7.22497668
4610 12.38283343
4700 7.986353811
5250 7.181504758
5730 7.341028336
5740 9.358567563
6880 7.267915751
9938 11.22566768
10138 10.42723389
10306 11.15082509
10899 7.153728352
10901 7.141706488
10902 7.123025531
10903 7.103977752
10904 7.349599791
10905 7.153728352
10906 7.135904547
10907 7.129433811

Total number of rows: 2666

Table truncated, full table size 48 Kbytes.




Supplementary file Size Download File type/resource
GSM2038965_14313028v60.gpr.gz 843.7 Kb (ftp)(http) GPR
Processed data included within Sample table

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