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Sample GSM212629 Query DataSets for GSM212629
Status Public on Jul 22, 2008
Title classIIhiMECs BALBaireWT rep1
Sample type RNA
 
Source name MHC class II high thymic medullary epithelial cells, BALBaireWT
Organism Mus musculus
Characteristics Gender: male Age: 3-4.5 weeks Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs
Strain: BALB/c
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description MHC class II high thymic medullary epithelial cells, BALBaireWT jos3127
Data processing RMA
 
Submission date Jul 23, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (1)
GSE8564 Analysis of Aire effects on individual mice of different genetic backgrounds
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1415670_at 297.558567915769
1415671_at 714.090010394163
1415672_at 2774.19688960447
1415673_at 320.958567915769
1415674_a_at 624.411338047481
1415675_at 527.139860927133
1415676_a_at 1957.63153036529
1415677_at 392.467088429981
1415678_at 932.635830623268
1415679_at 3126.17806124695
1415680_at 268.055036945075
1415681_at 306.307638731874
1415682_at 180.209351850332
1415683_at 2465.80856791577
1415684_at 293.575757433742
1415685_at 220.752159748914
1415686_at 2747.75856791577
1415687_a_at 4177.30039507434
1415688_at 1890.3052672107
1415689_s_at 531.840060037633

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM212629.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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