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Sample GSM212634 Query DataSets for GSM212634
Status Public on Jul 22, 2008
Title classIIhiMECs BALBaireKO rep2
Sample type RNA
 
Source name MHC class II high thymic medullary epithelial cells, BALBaireKO
Organism Mus musculus
Characteristics Gender: male Age: 3-4.5 weeks Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs Strain: BALB/c
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description MHC class II high thymic medullary epithelial cells, BALBaireKO jos3130
Data processing RMA
 
Submission date Jul 23, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (1)
GSE8564 Analysis of Aire effects on individual mice of different genetic backgrounds
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1415670_at 346.975243958005
1415671_at 881.289213847417
1415672_at 3126.76143197748
1415673_at 344.724562011275
1415674_a_at 779.852022006903
1415675_at 510.657575425385
1415676_a_at 1914.63321677038
1415677_at 478.811314029657
1415678_at 1244.34872080805
1415679_at 3506.25327444553
1415680_at 326.474685848047
1415681_at 329.04905209621
1415682_at 212.966104300579
1415683_at 2865.75275962574
1415684_at 359.55856791577
1415685_at 268.008567915769
1415686_at 2987.70027262742
1415687_a_at 4950.15406104746
1415688_at 1986.15048570624
1415689_s_at 607.290868325784

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM212634.CEL.gz 3.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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