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Sample GSM212635 Query DataSets for GSM212635
Status Public on Jul 22, 2008
Title classIIhiMECs BALBaireKO rep3
Sample type RNA
 
Source name MHC class II high thymic medullary epithelial cells, BALBaireKO
Organism Mus musculus
Characteristics Gender: male Age: 3-4.5 weeks Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs Strain: BALB/c
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description MHC class II high thymic medullary epithelial cells, BALBaireKO jos3381
Data processing RMA
 
Submission date Jul 23, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (1)
GSE8564 Analysis of Aire effects on individual mice of different genetic backgrounds
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1415670_at 242.137926222553
1415671_at 712.863389758481
1415672_at 2476.89038595235
1415673_at 228.28974633342
1415674_a_at 592.23762169341
1415675_at 349.486017617
1415676_a_at 1914.00227146823
1415677_at 293.110968675635
1415678_at 1178.65856791577
1415679_at 3095.07311661282
1415680_at 217.693802135399
1415681_at 221.263523530561
1415682_at 208.323435599242
1415683_at 2934.32671966216
1415684_at 326.53033139402
1415685_at 283.454915470713
1415686_at 2070.96532853091
1415687_a_at 4736.70856791577
1415688_at 1751.53819050562
1415689_s_at 504.642065122349

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM212635.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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