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Sample GSM234773 Query DataSets for GSM234773
Status Public on Dec 31, 2008
Title Mouse_WT_ES_clone 2
Sample type RNA
 
Source name Mouse_WT_ES_clone 2
Organism Mus musculus
Characteristics Mouse_E14 ES cell_Undifferentialted
Growth protocol ES medium + 15% FBS +LIF
Extracted molecule total RNA
Extraction protocol RNeasy mini Kit
Label biotin
Label protocol Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
 
Hybridization protocol Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
Scan protocol Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
Description Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
Data processing Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
 
Submission date Oct 04, 2007
Last update date Aug 28, 2018
Contact name Kazuhiko Uchida
E-mail(s) kazuhiko.uchida@cbiri.org
Phone 81-29-861-3000
Fax 81-29-855-5271
Organization name University of Tsukuba
Department Institute of Basic Medical Sciences
Lab Molecular and biological Oncology
Street address 1-1-1 Tennnoudai
City Tsukuba
State/province Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL1261
Series (1)
GSE9244 WT vs Klf5 KO ES
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE signal
ABS_CALL detection call
DETECTION P-VALUE detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 168.041 P 0.000389797
AFFX-BioB-M_at 228.132 P 4.42873e-05
AFFX-BioB-3_at 158.813 P 5.16732e-05
AFFX-BioC-5_at 484.016 P 5.16732e-05
AFFX-BioC-3_at 556.62 P 4.42873e-05
AFFX-BioDn-5_at 1118.66 P 4.42873e-05
AFFX-BioDn-3_at 1689.74 P 5.16732e-05
AFFX-CreX-5_at 5731.53 P 5.16732e-05
AFFX-CreX-3_at 6354.97 P 4.42873e-05
AFFX-DapX-5_at 25.8207 P 0.000581214
AFFX-DapX-M_at 62.8292 P 0.000856509
AFFX-DapX-3_at 129.351 P 0.000753643
AFFX-LysX-5_at 7.25285 A 0.0676785
AFFX-LysX-M_at 13.1423 A 0.139482
AFFX-LysX-3_at 44.063 P 7.00668e-05
AFFX-PheX-5_at 1.27574 A 0.834139
AFFX-PheX-M_at 1.62077 A 0.559354
AFFX-PheX-3_at 19.8765 P 0.00556451
AFFX-ThrX-5_at 7.35818 A 0.368438
AFFX-ThrX-M_at 9.97008 A 0.0726999

Total number of rows: 45101

Table truncated, full table size 1383 Kbytes.




Supplementary file Size Download File type/resource
GSM234773.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM234773.CHP.gz 248.8 Kb (ftp)(http) CHP
Processed data included within Sample table

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