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Sample GSM241881 Query DataSets for GSM241881
Status Public on Nov 13, 2007
Title pRb+/+.2
Sample type RNA
 
Source name Whole skin tissue
Organism Mus musculus
Characteristics Rb F19/F19
age: newborn
strain: FVB
tissue: skin
Extracted molecule total RNA
Extraction protocol Mouse skin tissue, obtained after birth, was preserved in RNAlater (Ambion), and disrupted and homogenized using Mixer Mill MM301 (Retsch). Total RNA was extracted and purified from 30 mg of skin using RNeasy Fibrous Tissue Mini kit (Qiagen) following manufacturers' recommendations
Label Biotin
Label protocol Affymetrix protocol
 
Hybridization protocol Affymetrix protocol
Scan protocol Affymetrix protocol
Description RNA integrity tested with Bioanalyzer (Agilent)
Data processing RMA normalization, log2 transformed, probe value mean-centered, mean=0, stdv=1
 
Submission date Nov 08, 2007
Last update date Aug 14, 2011
Contact name Ramon Garcia-Escudero
E-mail(s) ramon.garcia@ciemat.es, rgescudero@gmail.com
Organization name CIEMAT
Department Biomedical Innovation
Lab Molecular and Traslational Oncology
Street address Avda Complutense 40, Ed 70A
City Madrid
State/province Madrid
ZIP/Postal code 28040
Country Spain
 
Platform ID GPL339
Series (1)
GSE9567 p107 acts as a tumor suppressor in pRb-deficient epidermis.

Data table header descriptions
ID_REF
VALUE log2 signal values, probes mean centered, mean=0 and stdv=1

Data table
ID_REF VALUE
1415670_at 0.59313357
1415671_at 0.17728578
1415672_at 0.287029
1415673_at 0.98169184
1415674_a_at 0.9642571
1415675_at 0.03595576
1415676_a_at 1.3891361
1415677_at -1.0099082
1415678_at -0.027514374
1415679_at 0.14962879
1415680_at 0.8902392
1415681_at -0.328388
1415682_at 0.4026897
1415683_at 0.097990334
1415684_at 0.52343714
1415685_at 1.3698126
1415686_at 1.1147181
1415687_a_at 0.70938116
1415688_at 0.53406966
1415689_s_at -1.2500896

Total number of rows: 22690

Table truncated, full table size 498 Kbytes.




Supplementary file Size Download File type/resource
GSM241881.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table
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