|
| Status |
Public on Jan 07, 2017 |
| Title |
AH016-3 SPI1-/- |
| Sample type |
genomic |
| |
|
| Source name |
induced pluripotent stem cell line derived from dermal fibroblasts, SPI1-/- clone AH016-3
|
| Organism |
Homo sapiens |
| Characteristics |
gender: male
cell type: induced pluripotent stem cell line derived from dermal fibroblasts
genotype: SPI1-/-
|
| Treatment protocol |
untreated cell samples; iPSC lines all grown in mTeSR-1 medium + ES-qualified matrigel prior to harvest
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
genomic DNA was extracted using QIAGEN DNeasy blood and tissue kit
|
| Label |
Biotin (C, G), Dinitrophenyl (A, T)
|
| Label protocol |
Standard Illumina labelling protocol
|
| |
|
| Hybridization protocol |
Standard Illumina hybridisation protocol
|
| Scan protocol |
Standard Illumina scanning protocol for BeadChip Arrays
|
| Description |
iPSC-AH016-3 SPI1-/-
|
| Data processing |
The scanned data files were processed by GenomeStudio Genotyping module v1.9, using the cluster file humanomniexpress-24-v1-1-a-cluster-file.egt provided by Illumina. Raw data was also uploaded to KaryoStudio (Illumina) for generation of karyotype reports (see publication).
|
| |
|
| Submission date |
Jan 06, 2017 |
| Last update date |
Jan 07, 2017 |
| Contact name |
Julian Buchrieser |
| E-mail(s) |
julian.buchrieser@gmail.com
|
| Organization name |
Oxford University
|
| Department |
Dunn School of Pathology
|
| Lab |
William James
|
| Street address |
South Parks Road
|
| City |
Oxford |
| ZIP/Postal code |
Oxford, OX1 3RE |
| Country |
United Kingdom |
| |
|
| Platform ID |
GPL22678 |
| Series (1) |
| GSE93285 |
Human induced pluripotent stem cell-derived macrophages share ontogeny with MYB-independent tissue-resident macrophages |
|
