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GEO accession:
Sample GSM249378
Query DataSets for GSM249378
Status
Public on Dec 14, 2007
Title
Foam cells from subject without atherosclerosis, pair D.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Foam cells from subject without atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
181.38
P
0.00499819
AFFX-BioB-M_at
416.371
P
0.000195116
AFFX-BioB-3_at
193.406
P
0.000662269
AFFX-BioC-5_at
633.706
P
5.16732e-05
AFFX-BioC-3_at
380.171
P
5.16732e-05
AFFX-BioDn-5_at
424.473
P
0.000445901
AFFX-BioDn-3_at
2612.12
P
4.42873e-05
AFFX-CreX-5_at
3435.01
P
4.42873e-05
AFFX-CreX-3_at
7630.98
P
4.42873e-05
AFFX-DapX-5_at
3.88672
A
0.617401
AFFX-DapX-M_at
8.19189
A
0.382599
AFFX-DapX-3_at
3.29081
A
0.876428
AFFX-LysX-5_at
12.5773
A
0.5
AFFX-LysX-M_at
3.96261
A
0.794268
AFFX-LysX-3_at
10.9891
A
0.559354
AFFX-PheX-5_at
7.61035
A
0.712257
AFFX-PheX-M_at
1.38958
A
0.953518
AFFX-PheX-3_at
8.25495
A
0.783476
AFFX-ThrX-5_at
3.92089
A
0.904333
AFFX-ThrX-M_at
14.3252
A
0.239063
Total number of rows:
22283
Table truncated, full table size
660 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249378.CEL.gz
3.1 Mb
(ftp)
(http)
CEL
GSM249378.CHP.gz
5.5 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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