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GEO accession:
Sample GSM249389
Query DataSets for GSM249389
Status
Public on Dec 14, 2007
Title
Baseline macrophages from subject without atherosclerosis, pair H.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Baseline macrophages from subject without atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE86363
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
59.3819
A
0.116113
AFFX-BioB-M_at
100.696
P
0.00762003
AFFX-BioB-3_at
57.4825
P
0.0219019
AFFX-BioC-5_at
228.467
P
0.000445901
AFFX-BioC-3_at
105.812
P
0.00179591
AFFX-BioDn-5_at
96.1756
P
0.026111
AFFX-BioDn-3_at
926.84
P
0.000224668
AFFX-CreX-5_at
1344.39
P
4.42873e-05
AFFX-CreX-3_at
2654.33
P
5.16732e-05
AFFX-DapX-5_at
6.55454
A
0.275146
AFFX-DapX-M_at
20.3505
A
0.300606
AFFX-DapX-3_at
2.76821
A
0.971543
AFFX-LysX-5_at
1.62485
A
0.883887
AFFX-LysX-M_at
15.8568
A
0.559354
AFFX-LysX-3_at
4.97112
A
0.5
AFFX-PheX-5_at
12.9812
A
0.51489
AFFX-PheX-M_at
3.7972
A
0.932322
AFFX-PheX-3_at
15.9649
A
0.313723
AFFX-ThrX-5_at
2.70531
A
0.794268
AFFX-ThrX-M_at
4.0778
A
0.686277
Total number of rows:
22283
Table truncated, full table size
663 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249389.CEL.gz
3.5 Mb
(ftp)
(http)
CEL
GSM249389.CHP.gz
6.1 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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