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GEO accession:
Sample GSM249391
Query DataSets for GSM249391
Status
Public on Dec 14, 2007
Title
Baseline macrophages from subject with atherosclerosis, pair H.
Sample type
RNA
Source name
Monocyte-derived macrophages
Organism
Homo sapiens
Characteristics
Baseline macrophages from subject with atherosclerosis
Extracted molecule
total RNA
Extraction protocol
standard Affymetrix protocol
Label
Biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
Gene expression profile
Data processing
MAS 5.0
Submission date
Dec 13, 2007
Last update date
Jul 15, 2019
Contact name
Daniel Hägg
E-mail(s)
daniel.hagg@medic.gu.se
Phone
+46313423604
Organization name
Göteborg University
Department
Department of Molecular and Clinical Medicine
Street address
Vita Stråket 15
City
Göteborg
ZIP/Postal code
41345
Country
Sweden
Platform ID
GPL96
Series (1)
GSE9874
Expression profiles of human macrophages
Relations
Reanalyzed by
GSE86363
Reanalyzed by
GSE134312
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
102.682
P
0.0219019
AFFX-BioB-M_at
172.215
P
0.00359458
AFFX-BioB-3_at
110.867
P
0.00556451
AFFX-BioC-5_at
278.603
P
0.00010954
AFFX-BioC-3_at
155.237
P
0.000389797
AFFX-BioDn-5_at
154.13
P
0.00159257
AFFX-BioDn-3_at
1448.1
P
0.000195116
AFFX-CreX-5_at
1811.43
P
4.42873e-05
AFFX-CreX-3_at
3540.77
P
4.42873e-05
AFFX-DapX-5_at
20.9421
A
0.175328
AFFX-DapX-M_at
9.01396
A
0.645547
AFFX-DapX-3_at
4.4832
A
0.932322
AFFX-LysX-5_at
13.9899
A
0.382599
AFFX-LysX-M_at
23.225
A
0.382599
AFFX-LysX-3_at
13.166
A
0.425962
AFFX-PheX-5_at
1.59683
A
0.969024
AFFX-PheX-M_at
4.40359
A
0.814869
AFFX-PheX-3_at
37.7924
A
0.313723
AFFX-ThrX-5_at
2.41314
A
0.916408
AFFX-ThrX-M_at
9.05699
A
0.440646
Total number of rows:
22283
Table truncated, full table size
661 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM249391.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
GSM249391.CHP.gz
5.8 Mb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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